BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00035784
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         229   1e-58
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  217   7e-55
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    215   3e-54
emb|CAE05094.3| OSJNBa0009K15.14 [Oryza sativa Japonica Group]        215   3e-54
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                215   3e-54

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  229 bits (585), Expect = 1e-58
 Identities = 102/142 (71%), Positives = 126/142 (88%)
 Frame = -1

Query: 430 TASRPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLIGYSDA 251
           TASRPDIM++TCLCAR+QA+P+E HL AVKRIF+YLKGT  LGLWYP++S F L G+SD+
Sbjct: 192 TASRPDIMFSTCLCARYQANPKESHLAAVKRIFRYLKGTPNLGLWYPKDSGFDLTGFSDS 251

Query: 250 DFAGCKIDRKSTSGSCQFLGDRLVSWYSKKQKSISTSTAEAEYIAAGSCCAQILWMKNQL 71
           ++AGCK+DRKST+GSCQ LG +LVSW SKKQ S+STSTAEAEY+AAGSCCAQ+LWMKNQL
Sbjct: 252 NYAGCKVDRKSTTGSCQLLGGKLVSWTSKKQHSVSTSTAEAEYVAAGSCCAQVLWMKNQL 311

Query: 70  LDYGLKYSKVPIYCDNQSAIAM 5
            DY   ++++PI+CDN SAIA+
Sbjct: 312 ADYDQVFTEIPIFCDNSSAIAI 333


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  217 bits (553), Expect = 7e-55
 Identities = 102/141 (72%), Positives = 117/141 (82%)
 Frame = -1

Query: 427  ASRPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLIGYSDAD 248
            ASRPDIM + C+CARFQ+DP+E HLTAVKRI +YL  T   GLWYPR S F LIGYSDAD
Sbjct: 853  ASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDAD 912

Query: 247  FAGCKIDRKSTSGSCQFLGDRLVSWYSKKQKSISTSTAEAEYIAAGSCCAQILWMKNQLL 68
            +AGCKI+RKSTSG+CQFLG  LVSW SKKQ S++ STAEAEYIAAG CCAQ+LWM+  LL
Sbjct: 913  WAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLL 972

Query: 67   DYGLKYSKVPIYCDNQSAIAM 5
            DYG K +KVP+ CDN+SAI M
Sbjct: 973  DYGYKLTKVPLLCDNESAIKM 993


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  215 bits (547), Expect = 3e-54
 Identities = 101/141 (71%), Positives = 116/141 (82%)
 Frame = -1

Query: 427  ASRPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLIGYSDAD 248
            ASRPDIM + C+CARFQ+DP+E HLTAVKRI +YL  T   GLWYPR S F LIGYSDAD
Sbjct: 853  ASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDAD 912

Query: 247  FAGCKIDRKSTSGSCQFLGDRLVSWYSKKQKSISTSTAEAEYIAAGSCCAQILWMKNQLL 68
            +AGCKI+RKSTSG+CQFLG  LVSW SKKQ S++ STAEAEYIAAG CCAQ+LWM+  L 
Sbjct: 913  WAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLR 972

Query: 67   DYGLKYSKVPIYCDNQSAIAM 5
            DYG K +KVP+ CDN+SAI M
Sbjct: 973  DYGYKLTKVPLLCDNESAIKM 993


>emb|CAE05094.3| OSJNBa0009K15.14 [Oryza sativa Japonica Group]
          Length = 845

 Score =  215 bits (547), Expect = 3e-54
 Identities = 95/140 (67%), Positives = 117/140 (83%)
 Frame = -1

Query: 430  TASRPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLIGYSDA 251
            TASRPDIM++ C+CARFQA P+E HL AVKRI +YLK + T+GLWYP+ + FKL+GYSD+
Sbjct: 635  TASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKSAKFKLVGYSDS 694

Query: 250  DFAGCKIDRKSTSGSCQFLGDRLVSWYSKKQKSISTSTAEAEYIAAGSCCAQILWMKNQL 71
            D+A CK+DRKSTSGSCQ LG  LVSW SKKQ  ++ STAEAEY++AGSCCAQ+LWMK  L
Sbjct: 695  DYASCKVDRKSTSGSCQMLGRSLVSWSSKKQNFVALSTAEAEYVSAGSCCAQLLWMKQTL 754

Query: 70   LDYGLKYSKVPIYCDNQSAI 11
            LDYG+ ++K P+ CDN SAI
Sbjct: 755  LDYGISFTKTPLLCDNDSAI 774


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  215 bits (547), Expect = 3e-54
 Identities = 101/141 (71%), Positives = 116/141 (82%)
 Frame = -1

Query: 427  ASRPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLIGYSDAD 248
            ASRPDIM + C+CARFQ+DP+E HLTAVKRI +YL  T   GLWYPR S F LIGYSDAD
Sbjct: 1682 ASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDAD 1741

Query: 247  FAGCKIDRKSTSGSCQFLGDRLVSWYSKKQKSISTSTAEAEYIAAGSCCAQILWMKNQLL 68
            +AGCKI+RKSTSG+CQFLG  LVSW SKKQ S++ STAEAEYIAAG CCAQ+LWM+  L 
Sbjct: 1742 WAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLR 1801

Query: 67   DYGLKYSKVPIYCDNQSAIAM 5
            DYG K +KVP+ CDN+SAI M
Sbjct: 1802 DYGYKLTKVPLLCDNESAIKM 1822