BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00035724
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicag...    82   2e-18
ref|XP_003612651.1| Replication factor A protein [Medicago trunc...    80   7e-18
gb|EJF66126.1| replication factor-a protein [Dichomitus squalens...    93   1e-16
emb|CAH66127.1| OSIGBa0135L04.1 [Oryza sativa Indica Group]            93   1e-16
ref|XP_002115239.1| hypothetical protein TRIADDRAFT_50671 [Trich...    92   3e-16

>ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicago truncatula]
           gi|357477581|ref|XP_003609076.1| Replication factor A 51
           kDa subunit [Medicago truncatula]
           gi|357477673|ref|XP_003609122.1| Replication factor A 51
           kDa subunit [Medicago truncatula]
           gi|355507966|gb|AES89108.1| Replication factor A 51 kDa
           subunit [Medicago truncatula]
           gi|355510131|gb|AES91273.1| Replication factor A 51 kDa
           subunit [Medicago truncatula]
           gi|355510177|gb|AES91319.1| Replication factor A 51 kDa
           subunit [Medicago truncatula]
          Length = 502

 Score = 82.4 bits (202), Expect(2) = 2e-18
 Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 13/284 (4%)
 Frame = +2

Query: 89  LLKEGGVYSISDFKVVATKKNYRHV-NGDLALTFYHKTEV-KPMEDTDRIPRFCFQLTSF 262
           +L+EG +Y IS F+V   K+ Y  V N    L+FY    V +   D + IPR+ F+  +F
Sbjct: 90  VLQEGKIYVISHFEVSKNKEKYAVVENNPSMLSFYGDAIVTEEGSDDNTIPRYIFEFVNF 149

Query: 263 EAVPTLLRATNNFI-DVIGMVRDIGALESASNGANKLDVL---LVDNRRQQMIVTLWEDK 430
             +  + R     + DVIG + D+  +E  +    K+D+L   L D     + VTLW+D 
Sbjct: 150 NDL--IKRCGKEVLADVIGFIIDVDPIEEKTTVNGKVDMLSLHLGDGSGNVLKVTLWDDY 207

Query: 431 AAQFQEGLTATEGAAA---FVVITGLLAKQYSEMGQRHTLILNTNP*KC*GKILWQQHLN 601
           A  F + L     A       + T  L KQY   G     + ++        I   +  +
Sbjct: 208 APMFNQKLIDQMHATPKPNVAIFTSTLVKQYQ--GNCELYVSSSRSTTIYINIDTPEVAD 265

Query: 602 LVQACFRREKKFVTTERNALNEATIRDILDAELSEESQVLR----YLCEATIVAISSDDD 769
           L+ +   +     TTE  +L    ++ I +      S V +    Y C AT+  I   + 
Sbjct: 266 LILSSKGKNSVLKTTETLSLTNVDVKTISELLSMAVSGVYQGDVVYNCVATVDDILLKNG 325

Query: 770 WYYNACPKCPKKIRIEGDKFYCDNCSVEAKGYKERYMVVVSVID 901
            YY +CP C K +      F C++C+ +    K RY + + V D
Sbjct: 326 LYYVSCPHCRKTVSSTETDFNCEHCTKKVDYPKIRYRLELQVND 369



 Score = 37.7 bits (86), Expect(2) = 2e-18
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = +3

Query: 915  TTFTLFNKQVERLLGIPIERLVADI-GQENLTQDIPPLLNNIVGKKCAFHVKVNS-FNQG 1088
            T F LF +  E+L  + ++ L  D+  Q     D+P  L +I+G K  F VK++S F + 
Sbjct: 374  TIFVLFAEVAEQLAQLKLDDLTPDLENQTGRDSDLPKQLQHIIGSKHIFQVKLSSYFERR 433

Query: 1089 GRAGYTVVRLSEIIIQ 1136
            G   +T  ++ + +++
Sbjct: 434  GVQSFTAHKILKPVVK 449


>ref|XP_003612651.1| Replication factor A protein [Medicago truncatula]
           gi|355513986|gb|AES95609.1| Replication factor A protein
           [Medicago truncatula]
          Length = 477

 Score = 80.5 bits (197), Expect(2) = 7e-18
 Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 13/284 (4%)
 Frame = +2

Query: 89  LLKEGGVYSISDFKVVATKKNYRHV-NGDLALTFYHKTEV-KPMEDTDRIPRFCFQLTSF 262
           +L+EG +Y IS ++V   K+ Y  V N    L+FY    V +   D + IPR+ F+  +F
Sbjct: 58  VLQEGKIYVISHYEVSKNKEKYAVVENNPSMLSFYGDAIVTEEGSDDNTIPRYIFEFVNF 117

Query: 263 EAVPTLLRATNNFI-DVIGMVRDIGALESASNGANKLDVL---LVDNRRQQMIVTLWEDK 430
             +  + R     + DVIG + D+  +E  +    K+D+L   L D     + VTLW+D 
Sbjct: 118 NDL--IKRCGKEVLADVIGFIIDVDPIEEKTTVNGKVDMLSLHLGDGSGNVLKVTLWDDY 175

Query: 431 AAQFQEGLTATEGAAA---FVVITGLLAKQYSEMGQRHTLILNTNP*KC*GKILWQQHLN 601
           A  F + L     A       + T  L KQY   G     + ++        I   +  +
Sbjct: 176 APMFNQKLIDQMHATPKPNVAIFTSTLVKQYQ--GNCELYVSSSRSTTIYINIDTPEVAD 233

Query: 602 LVQACFRREKKFVTTERNALNEATIRDILDAELSEESQVLR----YLCEATIVAISSDDD 769
           L+ +         TTE  +L    ++ I +      S V +    Y C AT+  I   + 
Sbjct: 234 LILSSKGENSVLKTTETLSLTNVDVKTISELLSMAVSGVYQGDVVYNCVATVDDILLKNG 293

Query: 770 WYYNACPKCPKKIRIEGDKFYCDNCSVEAKGYKERYMVVVSVID 901
            YY +CP C K +      F C++C+ +    K RY + + V D
Sbjct: 294 LYYVSCPHCRKTVSSTETDFNCEHCTKKVDYPKIRYRLELQVND 337



 Score = 37.7 bits (86), Expect(2) = 7e-18
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = +3

Query: 915  TTFTLFNKQVERLLGIPIERLVADI-GQENLTQDIPPLLNNIVGKKCAFHVKVNS-FNQG 1088
            T F LF +  E+L  + ++ L  D+  Q     D+P  L +I+G K  F VK++S F + 
Sbjct: 342  TIFVLFAEVAEQLAQLKLDDLTPDLENQTGRDSDLPKQLQHIIGSKHIFQVKLSSYFERR 401

Query: 1089 GRAGYTVVRLSEIIIQ 1136
            G   +T  ++ + +++
Sbjct: 402  GVQSFTAHKILKPVVK 417


>gb|EJF66126.1| replication factor-a protein [Dichomitus squalens LYAD-421 SS1]
          Length = 601

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 84/317 (26%), Positives = 139/317 (43%), Gaps = 12/317 (3%)
 Frame = +2

Query: 41   QIMLAVWNNQKEDYFPLLKEGGVYSISDFKVVATKKNYRHVNGDLALTFYHKTEVKPMED 220
            +I    +N   ++ +  L++G VY IS  KV   KK + +VN +  LTF   TEV+   D
Sbjct: 216  EIRATAFNAAVDELYDRLQDGKVYLISKAKVNLAKKKFSNVNNEYELTFERSTEVEECHD 275

Query: 221  TDRIPRFCFQLTSFEAVPTLLRATNNFIDVIGMVRDIGALESASNGAN----KLDVLLVD 388
               +P   F   +  ++  +  A ++  DVIG+V+D+  L S ++ A     K ++ +VD
Sbjct: 276  ATDVPTVKFNFINISSLQDV--AKDSTCDVIGVVKDVSELSSITSKATSKIPKRELTIVD 333

Query: 389  NRRQQMIVTLWEDKAAQFQEG---LTATEGAAAFVVITGLLAKQYSEMGQRHTLILNTNP 559
                 + +TLW  +A Q+ E    + A +GA       G    +   M    T+ +N + 
Sbjct: 334  RSGYSVRMTLWGKQAEQYDENDHPVIAFKGAK-----VGDFQGRSLSMMSSSTMHVNPDI 388

Query: 560  *KC*GKILWQQHLNLVQACFRREKKFVTTERNALNEATIRDILDAELSEESQVLR---YL 730
             +      W       Q         V+      + A IR++ D ++SE     +   + 
Sbjct: 389  PEAHALRGWYDAAGADQQFQSHTVTMVSGGGITFDRAEIRNLNDVKVSELGMFDKPDNFC 448

Query: 731  CEATIVAISSDDDWYYNACPK--CPKKIRIEGDKFYCDNCSVEAKGYKERYMVVVSVIDD 904
              ATI+ I S D+  Y ACP   C KK+   G+ + C+ C       + RYMV ++V D 
Sbjct: 449  ARATIMHIKS-DNISYPACPTTGCGKKVLQMGESWRCEKCDKSFPKPEHRYMVAMAVSDY 507

Query: 905  FW*DHFHPL*QTGRTTF 955
                 F      G+T F
Sbjct: 508  SGQAWFQGFNDVGQTVF 524


>emb|CAH66127.1| OSIGBa0135L04.1 [Oryza sativa Indica Group]
          Length = 502

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 21/275 (7%)
 Frame = +2

Query: 86  PLLKEGGVYSISDFKVVATKKNYRHVNGDLALTFYHKTEVKP-MEDTDRIPRFCFQLTSF 262
           PLLKE  VY I  F V    + YR V+  L + F   T  +  +E     P   F LT F
Sbjct: 66  PLLKEQKVYYIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPF 125

Query: 263 EAVPTLLRATNNFIDVIGMVRDIGA---LESASNGANKLD--VLLVDNRRQQMIVTLWED 427
             +P L+  T  ++DV+G++ ++G+   +   S  A+ L   + + D     M +TLW +
Sbjct: 126 SDIPHLVDKTIFYVDVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPITLWGE 185

Query: 428 KAAQFQEGLTATEGA--AAFVVITGLLAKQYSEMGQRHTLILNTNP*KC*GKILWQQHLN 601
           +A  F        G   A  +V  G L K Y+ +G     +  ++P K      W  +L+
Sbjct: 186 RADAFDANSVYNAGQTQAQVIVFVGTLVKDYTGLG---LTVTGSSPCK------WYLNLD 236

Query: 602 LVQACFRREK--------KFVTTERNALN-----EATIRDILDAELSEESQVLRYLCEAT 742
           + +    +E          +V       N     E TI++IL A    +++  R++   T
Sbjct: 237 IPEVLELKESFSANFRPVSWVDNPATGYNQDTAEEKTIQEIL-ALNPHKNRSTRFIVNVT 295

Query: 743 IVAISSDDDWYYNACPKCPKKIRIEGDKFYCDNCS 847
           +  I S++ W+YN+C  C +  +  G  + C +CS
Sbjct: 296 VRRICSENSWWYNSCRLCYRTSKPYGSSYKCSSCS 330


>ref|XP_002115239.1| hypothetical protein TRIADDRAFT_50671 [Trichoplax adhaerens]
            gi|190582010|gb|EDV22084.1| hypothetical protein
            TRIADDRAFT_50671 [Trichoplax adhaerens]
          Length = 556

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 18/305 (5%)
 Frame = +2

Query: 41   QIMLAVWNNQKEDYFPLLKEGGVYSISDFKVVATKKNYRHVNGDLALTFYHKTEVKPMED 220
            +I    + +Q E ++ +L+   VY IS   +    KN+  +  D  +TF ++T V+P +D
Sbjct: 173  EIRATAFRDQVEKFYDVLEVNKVYYISRCSIKTANKNFTSIKNDYEMTFTNETAVEPCDD 232

Query: 221  TDRIPRFCFQLTSFEAVPTLLRATNNFIDVIGMVR---DIGALESASN-GANKLDVLLVD 388
               +P+  F       +    +     IDV+G+V+   D+  + + SN   NK D+ LVD
Sbjct: 233  IASLPKVSFNFVRIGDIEN--QPAERMIDVVGVVKSADDVVTINTKSNRQVNKRDIELVD 290

Query: 389  NRRQQMIVTLWEDKAAQF---QEGLTATEGAAAFVVITGLLAKQYSEMGQRHTLILNTNP 559
            +  + + +TLW   A +F   Q  + A  GA     +T    +  S +G      L TNP
Sbjct: 291  DSGKVVRLTLWGTNAEEFDGSQFPVVAVRGAR----VTEFGGRSLSVVGSSQ---LMTNP 343

Query: 560  *KC*GKIL--WQQHLNLVQACFRREKKFVTTERNAL-------NEATIRDILDAELSEES 712
                  IL  W       Q     E   ++T+R  +       N   I DI    L ++ 
Sbjct: 344  DIPEAHILRGWFDVQGKDQ-----ELVSISTKRGDIGSPGFSGNWKNISDIHGENLGQQE 398

Query: 713  QVLRYLCEATIVAISSDDDWYYNACPK--CPKKIRIEGDKFYCDNCSVEAKGYKERYMVV 886
            +   +  +ATI+ I   ++  Y ACPK  C KK+  +G  + C+ C+     +K R M+ 
Sbjct: 399  KADYFNLKATIIYIRK-ENLMYKACPKEDCNKKVIDQGGSYRCEKCNQTFPDFKYRLMIS 457

Query: 887  VSVID 901
             S++D
Sbjct: 458  ASIVD 462