BLASTX nr result

ID: Angelica22_contig00035223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00035223
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago tr...    99   2e-31
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1...   100   1e-30
ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1...    93   1e-30
ref|XP_004163889.1| PREDICTED: serine hydroxymethyltransferase 1...    99   2e-29
ref|XP_004146284.1| PREDICTED: serine hydroxymethyltransferase 1...    99   2e-29

>ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago truncatula]
           gi|355482048|gb|AES63251.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
          Length = 593

 Score = 99.0 bits (245), Expect(2) = 2e-31
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = +1

Query: 283 GNQSLRVADPDVFGVIDKEKDRQVKGIELIASKNFVCRAVVEALGSHLTNKYSEGMCGAR 462
           G+Q L+VADPD++ +I+KEK RQ KGIELIAS+NFVCRAV+EALGSHLTNKYSEGM GAR
Sbjct: 132 GDQPLQVADPDIYEIIEKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAR 191



 Score = 61.6 bits (148), Expect(2) = 2e-31
 Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 23/106 (21%)
 Frame = +2

Query: 38  PQSNLNLELQFSVNNEIDSIPSSIPLQLMDPT------------SVNEKDSDEVEEFRIL 181
           P  ++ L L+ S  +  + +P+ +PLQLM+P             S N++D  EVEEFRIL
Sbjct: 28  PDDSIALHLESSFRDPSNPVPT-VPLQLMEPQTEKENGNAIDIESNNDEDDREVEEFRIL 86

Query: 182 GHSMCLKRRKYDEGLCSVDQHCS-----------LELRRKVVKAWG 286
           GHSMC+KRR+  E      +  S           LE R+  V++WG
Sbjct: 87  GHSMCIKRRRDSESSTITTKRASVESDRGDRLLDLESRKAAVRSWG 132


>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
          Length = 577

 Score = 99.8 bits (247), Expect(2) = 1e-30
 Identities = 49/60 (81%), Positives = 54/60 (90%)
 Frame = +1

Query: 283 GNQSLRVADPDVFGVIDKEKDRQVKGIELIASKNFVCRAVVEALGSHLTNKYSEGMCGAR 462
           GNQ L VADPDVF +++KEK RQ KGIELIAS+NFVCRAV+EALGSHLTNKYSEGM GAR
Sbjct: 116 GNQRLCVADPDVFDIMEKEKRRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAR 175



 Score = 58.5 bits (140), Expect(2) = 1e-30
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
 Frame = +2

Query: 11  LGFVMNSAQP--QSNLNLELQFSVNNEIDSIPSSIPLQLMDPTSVNEK---------DSD 157
           LGF  +S+      ++  ++  S     + +P++ PLQL++     E          + +
Sbjct: 11  LGFSSSSSVQIADDSIAFQIDSSFRESTNPMPTA-PLQLLEENHRGENGGGGGESADEEE 69

Query: 158 EVEEFRILGHSMCLKRRKYDEGLCSV----DQHCSLELRRKVVKAWG 286
           +VEEFRILGHSMCLKRR+  E  CS          LE RR  V+AWG
Sbjct: 70  KVEEFRILGHSMCLKRRRDGEVTCSAVRRDPMEAELEARRSAVRAWG 116


>ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
          Length = 563

 Score = 92.8 bits (229), Expect(2) = 1e-30
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = +1

Query: 283 GNQSLRVADPDVFGVIDKEKDRQVKGIELIASKNFVCRAVVEALGSHLTNKYSEGMCGAR 462
           G Q L +ADPDV  +++KEK RQ +GIELIAS+NFVCRAV+EALGSHLTNKYSEGM GAR
Sbjct: 102 GCQPLSIADPDVHEIMEKEKKRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAR 161



 Score = 65.1 bits (157), Expect(2) = 1e-30
 Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
 Frame = +2

Query: 23  MNSAQPQSNLNLELQFSVNNEIDSIPSSIPLQLMDPTSVN-----EKDSDE---VEEFRI 178
           M+ + PQSNL+L    S  +        +PLQLM+P + N     E D DE   VEEFRI
Sbjct: 1   MDLSHPQSNLSLGFSSSHASPPPRSDPPVPLQLMEPQTENGNLDVESDDDEDKEVEEFRI 60

Query: 179 LGHSMCLKRRKYDEGLCS------VDQHCSLELRRKVVKAWG 286
           LGHSMCLKRR+  +   S      V     L+ R+  V+AWG
Sbjct: 61  LGHSMCLKRRRDCDSSSSSSAAKRVSVEPDLDARKAAVRAWG 102


>ref|XP_004163889.1| PREDICTED: serine hydroxymethyltransferase 1-like [Cucumis sativus]
          Length = 585

 Score = 99.0 bits (245), Expect(2) = 2e-29
 Identities = 45/60 (75%), Positives = 55/60 (91%)
 Frame = +1

Query: 283 GNQSLRVADPDVFGVIDKEKDRQVKGIELIASKNFVCRAVVEALGSHLTNKYSEGMCGAR 462
           GNQ+LR ADP ++G+++KEK RQ+ GIELIAS+N+VCRAV+EALGSHLTNKYSEGM GAR
Sbjct: 124 GNQTLRAADPKLYGIMEKEKQRQINGIELIASENYVCRAVMEALGSHLTNKYSEGMPGAR 183



 Score = 55.1 bits (131), Expect(2) = 2e-29
 Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 19/79 (24%)
 Frame = +2

Query: 107 IPLQLMDPTSVNEKDSD-------------EVEEFRILGHSMCLKRRKYDEGLC------ 229
           +PLQLM+P + N +D +             +VEEFRILGHSMCLKRR+  E         
Sbjct: 46  VPLQLMEPQTENHRDENGDAKRDDDECDDRDVEEFRILGHSMCLKRRRDGESSSLLGSTK 105

Query: 230 SVDQHCSLELRRKVVKAWG 286
            V     +E RR  V++WG
Sbjct: 106 RVSCEFDMETRRSSVRSWG 124


>ref|XP_004146284.1| PREDICTED: serine hydroxymethyltransferase 1-like [Cucumis sativus]
          Length = 585

 Score = 99.0 bits (245), Expect(2) = 2e-29
 Identities = 45/60 (75%), Positives = 55/60 (91%)
 Frame = +1

Query: 283 GNQSLRVADPDVFGVIDKEKDRQVKGIELIASKNFVCRAVVEALGSHLTNKYSEGMCGAR 462
           GNQ+LR ADP ++G+++KEK RQ+ GIELIAS+N+VCRAV+EALGSHLTNKYSEGM GAR
Sbjct: 124 GNQTLRAADPKLYGIMEKEKQRQINGIELIASENYVCRAVMEALGSHLTNKYSEGMPGAR 183



 Score = 55.1 bits (131), Expect(2) = 2e-29
 Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 19/79 (24%)
 Frame = +2

Query: 107 IPLQLMDPTSVNEKDSD-------------EVEEFRILGHSMCLKRRKYDEGLC------ 229
           +PLQLM+P + N +D +             +VEEFRILGHSMCLKRR+  E         
Sbjct: 46  VPLQLMEPQTENHRDENGDAKRDDDECDDRDVEEFRILGHSMCLKRRRDGESSSLLGSTK 105

Query: 230 SVDQHCSLELRRKVVKAWG 286
            V     +E RR  V++WG
Sbjct: 106 RVSCEFDMETRRSSVRSWG 124


Top