BLASTX nr result

ID: Angelica22_contig00034801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034801
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   8e-12
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    62   2e-11
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 61   9e-11
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    62   1e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    60   1e-10

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 62.0 bits (149), Expect(2) = 8e-12
 Identities = 29/68 (42%), Positives = 46/68 (67%)
 Frame = +3

Query: 3   ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182
           I+K++  RMKG++  ++   QS F+PGR I DN+LLA  L + Y  +  SP C++K+DI 
Sbjct: 527 ISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIR 586

Query: 183 KASDTINF 206
           KA D++ +
Sbjct: 587 KAYDSVEW 594



 Score = 32.7 bits (73), Expect(2) = 8e-12
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 214 LQRVGFPAVFLGWLKKCITTTMFSV 288
           L   GFP+ F+GW+ +C++T  +SV
Sbjct: 601 LYEFGFPSRFVGWIMECVSTVSYSV 625


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 62.4 bits (150), Expect(2) = 2e-11
 Identities = 33/68 (48%), Positives = 46/68 (67%)
 Frame = +3

Query: 3    ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182
            I+KI+A R+K ++ S I  NQSAFV  R + +NVLLA  L K YH E  +P C +K+DI 
Sbjct: 839  ISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDIS 898

Query: 183  KASDTINF 206
            KA D++ +
Sbjct: 899  KAFDSVQW 906



 Score = 30.8 bits (68), Expect(2) = 2e-11
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 214 LQRVGFPAVFLGWLKKCITTTMFSV 288
           L+ + FP  F  W+K CI+T  FSV
Sbjct: 913 LEALNFPETFRHWIKLCISTATFSV 937


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 61.2 bits (147), Expect(2) = 9e-11
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = +3

Query: 3   ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182
           I+KI+A R+K ++ + I  NQSAFV  R + +NVLLA  L K YH +  SP C +K+DI 
Sbjct: 115 ISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDIS 174

Query: 183 KASDTINF 206
           KA D++ +
Sbjct: 175 KAFDSVQW 182



 Score = 30.0 bits (66), Expect(2) = 9e-11
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 214 LQRVGFPAVFLGWLKKCITTTMFSV 288
           L+ + FP  F  W+K CI+T  FSV
Sbjct: 189 LEALNFPENFCHWIKLCISTATFSV 213


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1277

 Score = 61.6 bits (148), Expect(2) = 1e-10
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = +3

Query: 3   ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182
           I+KI+A R+K ++ + I  NQSAFV  R + +NVLLA  L K YH +  SP C +K+DI 
Sbjct: 684 ISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSISPRCAMKIDIS 743

Query: 183 KASDTINF 206
           KA D++ +
Sbjct: 744 KAFDSVQW 751



 Score = 29.3 bits (64), Expect(2) = 1e-10
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 214 LQRVGFPAVFLGWLKKCITTTMFSV 288
           L+ + FP  F  W+K CI+T  FSV
Sbjct: 758 LEALKFPEKFRHWIKLCISTATFSV 782


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 59.7 bits (143), Expect(2) = 1e-10
 Identities = 31/68 (45%), Positives = 44/68 (64%)
 Frame = +3

Query: 3   ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182
           I+KI+A R+K V+   I  NQSAFV  R + +N+LLA  L K YH +  S  C +K+DI 
Sbjct: 542 ISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDIS 601

Query: 183 KASDTINF 206
           KA D++ +
Sbjct: 602 KAFDSVQW 609



 Score = 31.2 bits (69), Expect(2) = 1e-10
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 223 VGFPAVFLGWLKKCITTTMFSV 288
           +GFP  F+ W+  CITT  FSV
Sbjct: 619 LGFPREFIHWINICITTASFSV 640


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