BLASTX nr result
ID: Angelica22_contig00034801
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00034801 (290 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 8e-12 gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 62 2e-11 gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 61 9e-11 gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 62 1e-10 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 60 1e-10 >emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1110 Score = 62.0 bits (149), Expect(2) = 8e-12 Identities = 29/68 (42%), Positives = 46/68 (67%) Frame = +3 Query: 3 ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182 I+K++ RMKG++ ++ QS F+PGR I DN+LLA L + Y + SP C++K+DI Sbjct: 527 ISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIR 586 Query: 183 KASDTINF 206 KA D++ + Sbjct: 587 KAYDSVEW 594 Score = 32.7 bits (73), Expect(2) = 8e-12 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 214 LQRVGFPAVFLGWLKKCITTTMFSV 288 L GFP+ F+GW+ +C++T +SV Sbjct: 601 LYEFGFPSRFVGWIMECVSTVSYSV 625 >gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1529 Score = 62.4 bits (150), Expect(2) = 2e-11 Identities = 33/68 (48%), Positives = 46/68 (67%) Frame = +3 Query: 3 ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182 I+KI+A R+K ++ S I NQSAFV R + +NVLLA L K YH E +P C +K+DI Sbjct: 839 ISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDIS 898 Query: 183 KASDTINF 206 KA D++ + Sbjct: 899 KAFDSVQW 906 Score = 30.8 bits (68), Expect(2) = 2e-11 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 214 LQRVGFPAVFLGWLKKCITTTMFSV 288 L+ + FP F W+K CI+T FSV Sbjct: 913 LEALNFPETFRHWIKLCISTATFSV 937 >gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] Length = 740 Score = 61.2 bits (147), Expect(2) = 9e-11 Identities = 32/68 (47%), Positives = 46/68 (67%) Frame = +3 Query: 3 ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182 I+KI+A R+K ++ + I NQSAFV R + +NVLLA L K YH + SP C +K+DI Sbjct: 115 ISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDIS 174 Query: 183 KASDTINF 206 KA D++ + Sbjct: 175 KAFDSVQW 182 Score = 30.0 bits (66), Expect(2) = 9e-11 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 214 LQRVGFPAVFLGWLKKCITTTMFSV 288 L+ + FP F W+K CI+T FSV Sbjct: 189 LEALNFPENFCHWIKLCISTATFSV 213 >gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1277 Score = 61.6 bits (148), Expect(2) = 1e-10 Identities = 32/68 (47%), Positives = 46/68 (67%) Frame = +3 Query: 3 ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182 I+KI+A R+K ++ + I NQSAFV R + +NVLLA L K YH + SP C +K+DI Sbjct: 684 ISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSISPRCAMKIDIS 743 Query: 183 KASDTINF 206 KA D++ + Sbjct: 744 KAFDSVQW 751 Score = 29.3 bits (64), Expect(2) = 1e-10 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 214 LQRVGFPAVFLGWLKKCITTTMFSV 288 L+ + FP F W+K CI+T FSV Sbjct: 758 LEALKFPEKFRHWIKLCISTATFSV 782 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 59.7 bits (143), Expect(2) = 1e-10 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +3 Query: 3 ITKIVARRMKGVMASLICPNQSAFVPGRTIGDNVLLA*ALCKVYHIEVGSPECVVKLDIW 182 I+KI+A R+K V+ I NQSAFV R + +N+LLA L K YH + S C +K+DI Sbjct: 542 ISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDIS 601 Query: 183 KASDTINF 206 KA D++ + Sbjct: 602 KAFDSVQW 609 Score = 31.2 bits (69), Expect(2) = 1e-10 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +1 Query: 223 VGFPAVFLGWLKKCITTTMFSV 288 +GFP F+ W+ CITT FSV Sbjct: 619 LGFPREFIHWINICITTASFSV 640