BLASTX nr result

ID: Angelica22_contig00034697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034697
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196175.1| anaphase-promoting complex subunit 1 [Arabidops...    55   5e-06
ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...    55   8e-06
emb|CBI25461.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|NP_196175.1| anaphase-promoting complex subunit 1 [Arabidopsis thaliana]
           gi|75170223|sp|Q9FFF9.1|APC1_ARATH RecName:
           Full=Anaphase-promoting complex subunit 1; AltName:
           Full=Cyclosome subunit 1; AltName: Full=Protein EMBRYO
           DEFECTIVE 2771 gi|10178133|dbj|BAB11545.1| meiotic check
           point regulator-like protein [Arabidopsis thaliana]
           gi|332003506|gb|AED90889.1| anaphase-promoting complex
           subunit 1 [Arabidopsis thaliana]
          Length = 1678

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   NISGETVSVPLSRPVVSIWPLPSGLLL-QVAEGNXXXXXXXXXXXXXXXXRDMLRAKRDM 177
           N SGE VSVPL R V SIWPLP GLLL Q  E N                R+MLR ++++
Sbjct: 115 NTSGEVVSVPLMRTVKSIWPLPCGLLLEQAGEVNPPSHVPFSPVSPILGSREMLRQRKEV 174

Query: 178 KGYSPQN 198
              SPQN
Sbjct: 175 GNSSPQN 181


>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis
           vinifera]
          Length = 1716

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = +1

Query: 1   NISGETVSVPLSRPVVSIWPLPSGLLLQVA-EGNXXXXXXXXXXXXXXXXRDMLRAKRDM 177
           N SGE VS+PL+R V SIWPLP GLLLQ A EG                 RD+ R KR++
Sbjct: 123 NTSGEVVSIPLARTVTSIWPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRPKREI 182

Query: 178 KGYSPQNLF 204
            G+SP+  F
Sbjct: 183 -GHSPRQNF 190


>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = +1

Query: 1   NISGETVSVPLSRPVVSIWPLPSGLLLQVA-EGNXXXXXXXXXXXXXXXXRDMLRAKRDM 177
           N SGE VS+PL+R V SIWPLP GLLLQ A EG                 RD+ R KR++
Sbjct: 123 NTSGEVVSIPLARTVTSIWPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRPKREI 182

Query: 178 KGYSPQNLF 204
            G+SP+  F
Sbjct: 183 -GHSPRQNF 190


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