BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034631
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...    59   2e-12
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...    59   2e-12
gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica...    62   5e-12
ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group] g...    62   5e-12
gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subc...    62   5e-12

>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1980

 Score = 58.5 bits (140), Expect(2) = 2e-12
 Identities = 27/59 (45%), Positives = 43/59 (72%)
 Frame = +2

Query: 38  ISFTEDDYEDIIWPHEDPLVINPIIGENKVWRVLIDGGSSVNILYHRTYCKMNLGGEQL 214
           ISF  +D E I++PH+DPLV++  I + +V RVLIDGGSS ++L++  + KM +  ++L
Sbjct: 737 ISFGPEDAEGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRL 795



 Score = 38.5 bits (88), Expect(2) = 2e-12
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +1

Query: 214 GNQPVPIEGTITLPVVLGKAPYTVEKEAKFYVVRVDSPYNGILGRPALSLFQ 369
           G Q V   G I+L VV GK     ++E  F VV +   YN ILGR  +++F+
Sbjct: 806 GGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFE 857


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1889

 Score = 58.5 bits (140), Expect(2) = 2e-12
 Identities = 27/59 (45%), Positives = 43/59 (72%)
 Frame = +2

Query: 38  ISFTEDDYEDIIWPHEDPLVINPIIGENKVWRVLIDGGSSVNILYHRTYCKMNLGGEQL 214
           ISF  +D E I++PH+DPLV++  I + +V RVLIDGGSS ++L++  + KM +  ++L
Sbjct: 737 ISFGPEDAEGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRL 795



 Score = 38.5 bits (88), Expect(2) = 2e-12
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +1

Query: 214 GNQPVPIEGTITLPVVLGKAPYTVEKEAKFYVVRVDSPYNGILGRPALSLFQ 369
           G Q V   G I+L VV GK     ++E  F VV +   YN ILGR  +++F+
Sbjct: 806 GGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFE 857


>gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 971

 Score = 62.0 bits (149), Expect(2) = 5e-12
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +2

Query: 38  ISFTEDDYEDIIWPHEDPLVINPIIGENKVWRVLIDGGSSVNILYHRTYCKMNLGGEQL 214
           ISF  +D E +++PH+DPLVI+  I   +VWR+L+DGGSS ++++   Y KM L  + L
Sbjct: 715 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQAL 773



 Score = 33.5 bits (75), Expect(2) = 5e-12
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 205 RAVGNQPVPIEGTITLPVVLGKAPYTVEKEAKFYVVRVDSPYNGILGRPALSLFQ 369
           R  G + V + G   L +  G      E++  F VV +   YN ILGR  L+ F+
Sbjct: 781 RGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFE 835


>ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group]
           gi|113548927|dbj|BAF12370.1| Os03g0439900, partial
           [Oryza sativa Japonica Group]
          Length = 420

 Score = 62.0 bits (149), Expect(2) = 5e-12
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +2

Query: 38  ISFTEDDYEDIIWPHEDPLVINPIIGENKVWRVLIDGGSSVNILYHRTYCKMNLGGEQL 214
           ISF  +D E +++PH+DPLVI+  I   +VWR+L+DGGSS ++++   Y KM L  + L
Sbjct: 164 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQAL 222



 Score = 33.5 bits (75), Expect(2) = 5e-12
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 205 RAVGNQPVPIEGTITLPVVLGKAPYTVEKEAKFYVVRVDSPYNGILGRPALSLFQ 369
           R  G + V + G   L +  G      E++  F VV +   YN ILGR  L+ F+
Sbjct: 230 RGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFE 284


>gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 406

 Score = 62.0 bits (149), Expect(2) = 5e-12
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +2

Query: 38  ISFTEDDYEDIIWPHEDPLVINPIIGENKVWRVLIDGGSSVNILYHRTYCKMNLGGEQL 214
           ISF  +D E +++PH+DPLVI+  I   +VWR+L+DGGSS ++++   Y KM L  + L
Sbjct: 150 ISFGPEDAEGVMFPHQDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQAL 208



 Score = 33.5 bits (75), Expect(2) = 5e-12
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 205 RAVGNQPVPIEGTITLPVVLGKAPYTVEKEAKFYVVRVDSPYNGILGRPALSLFQ 369
           R  G + V + G   L +  G      E++  F VV +   YN ILGR  L+ F+
Sbjct: 216 RGFGGEAVQVLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFE 270