BLASTX nr result

ID: Angelica22_contig00034569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034569
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              97   1e-18
gb|ADB85338.1| putative retrotransposon protein [Phyllostachys e...    94   1e-17
gb|ADB85414.1| putative retrotransposon protein [Phyllostachys e...    93   2e-17
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                   93   3e-17
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              91   8e-17

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/85 (50%), Positives = 63/85 (74%)
 Frame = -1

Query: 258  SKSDDKCLPFFQTLKKVKFFEWTQESQEAFEQLKKYMPEAPLLAKPSPEETLYLYLAVFE 79
            S+S DKCLPF+  LK+   F+W ++S+EAFE+LK Y+   P+L KP   ETLYLY+AV +
Sbjct: 1070 SRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSD 1129

Query: 78   QALSDVLIKEEKKVEKPIYYVSKVL 4
             A+S VL++E++  ++PI+Y SK L
Sbjct: 1130 HAVSSVLVREDRGEQRPIFYTSKSL 1154


>gb|ADB85338.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1087

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/82 (52%), Positives = 61/82 (74%)
 Frame = -1

Query: 246  DKCLPFFQTLKKVKFFEWTQESQEAFEQLKKYMPEAPLLAKPSPEETLYLYLAVFEQALS 67
            +K LP F+ L+K + FEW++E+  AFE +K+Y   AP+L  P PEETL +YLAV  QA+S
Sbjct: 776  EKGLPSFKLLRKHEGFEWSEEANAAFEDVKRYRMSAPVLVSPKPEETLLIYLAVAPQAVS 835

Query: 66   DVLIKEEKKVEKPIYYVSKVLH 1
             VL+ E + V++P+YYVS+VLH
Sbjct: 836  AVLVVERENVQRPVYYVSEVLH 857


>gb|ADB85414.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1429

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/82 (51%), Positives = 59/82 (71%)
 Frame = -1

Query: 246  DKCLPFFQTLKKVKFFEWTQESQEAFEQLKKYMPEAPLLAKPSPEETLYLYLAVFEQALS 67
            +K LPFF+ L+K   FEWT+E+ +AFE+LKKY+   P+L  P   ETL +Y+A   Q +S
Sbjct: 947  EKGLPFFKLLRKHGNFEWTKEANDAFEELKKYLTSTPVLVSPRSGETLLIYVAATPQTVS 1006

Query: 66   DVLIKEEKKVEKPIYYVSKVLH 1
            DVL+ E   +++PIYYVS+VLH
Sbjct: 1007 DVLVVERDNIQRPIYYVSEVLH 1028


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/82 (50%), Positives = 59/82 (71%)
 Frame = -1

Query: 246  DKCLPFFQTLKKVKFFEWTQESQEAFEQLKKYMPEAPLLAKPSPEETLYLYLAVFEQALS 67
            +K LPFF+ L+K   FEWT+E+ +AFE+LKKY+   P+L  P P ETL +Y+A   Q +S
Sbjct: 1321 EKGLPFFKLLRKHGSFEWTKEANDAFEELKKYLTSTPVLVSPRPGETLLIYVAATLQTVS 1380

Query: 66   DVLIKEEKKVEKPIYYVSKVLH 1
             VL+ E   +++P+YYVS+VLH
Sbjct: 1381 GVLVVERDNIQRPVYYVSEVLH 1402


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/83 (51%), Positives = 60/83 (72%)
 Frame = -1

Query: 258 SKSDDKCLPFFQTLKKVKFFEWTQESQEAFEQLKKYMPEAPLLAKPSPEETLYLYLAVFE 79
           S+S DK LPF+Q LK  K F W ++ +EAF QLK Y+   P+L+KP  +E LYLY++V  
Sbjct: 267 SRSTDKSLPFYQILKGNKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVDEKLYLYVSVSN 326

Query: 78  QALSDVLIKEEKKVEKPIYYVSK 10
            A+S VL++E++  +KPIYYVSK
Sbjct: 327 HAVSGVLVREDRGEQKPIYYVSK 349


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