BLASTX nr result

ID: Angelica22_contig00034542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034542
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511417.1| Polygalacturonase-1 non-catalytic subunit be...    86   2e-15
emb|CBI28512.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002266341.1| PREDICTED: probable polygalacturonase non-ca...    81   1e-13
ref|XP_002318036.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
emb|CBI15046.3| unnamed protein product [Vitis vinifera]               77   1e-12

>ref|XP_002511417.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative
           [Ricinus communis] gi|223550532|gb|EEF52019.1|
           Polygalacturonase-1 non-catalytic subunit beta
           precursor, putative [Ricinus communis]
          Length = 637

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/81 (50%), Positives = 58/81 (71%)
 Frame = -2

Query: 245 TTLLLFGFLFAVISSSFSTVSLGATTTRSTRLKTKENPFTAKASLIRYWNKHIYNNIPQP 66
           T L  F FLF  ISSS  +++  ++T  +     + NPF+ KASLIRYWNKHI+N +P+ 
Sbjct: 11  TVLFFFFFLFISISSSKLSLAAPSSTAHNPHSPPELNPFSPKASLIRYWNKHIFNTLPKS 70

Query: 65  DFLISKASPLSAVDTAFFTKL 3
            FL+SKASPL+A+D+AF ++L
Sbjct: 71  PFLLSKASPLTAIDSAFLSRL 91


>emb|CBI28512.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = -2

Query: 239 LLLFGFLFAVISSSFSTVSLGATTTRSTRLKTKENPFTAKASLIRYWNKHIYNNIPQPDF 60
           LL   FL  + S+SF  V+LG     S +    ENPFT +ASL+RYWNK I + +P+  F
Sbjct: 7   LLSHLFLIFLFSASFPNVALGGAGEESGKPVAGENPFTPRASLLRYWNKQIGSGLPKSTF 66

Query: 59  LISKASPLSAVDTAFFTKL 3
           L+SKASPLSAV++A FTKL
Sbjct: 67  LLSKASPLSAVESATFTKL 85


>ref|XP_002266341.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP630-like [Vitis vinifera]
          Length = 633

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = -2

Query: 239 LLLFGFLFAVISSSFSTVSLGATTTRSTRLKTKENPFTAKASLIRYWNKHIYNNIPQPDF 60
           LL   FL  + S+SF  V+LG     S +    ENPFT +ASL+RYWNK I + +P+  F
Sbjct: 7   LLSHLFLIFLFSASFPNVALGGAGEESGKPVAGENPFTPRASLLRYWNKQIGSGLPKSTF 66

Query: 59  LISKASPLSAVDTAFFTKL 3
           L+SKASPLSAV++A FTKL
Sbjct: 67  LLSKASPLSAVESATFTKL 85


>ref|XP_002318036.1| predicted protein [Populus trichocarpa] gi|222858709|gb|EEE96256.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
 Frame = -2

Query: 188 VSLGATTTRSTR---LKTKENPFTAKASLIRYWNKHIYNNIPQPDFLISKASPLSAVDTA 18
           VS  ATTT S     L T  NPF+ +ASLIRYWNKHI N++P+P FL+SKASPLSA+D+A
Sbjct: 3   VSFAATTTSSLHKQNLSTPLNPFSPRASLIRYWNKHISNSLPKPLFLLSKASPLSAIDSA 62

Query: 17  FFTKL 3
             TKL
Sbjct: 63  ILTKL 67


>emb|CBI15046.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/81 (51%), Positives = 53/81 (65%)
 Frame = -2

Query: 245 TTLLLFGFLFAVISSSFSTVSLGATTTRSTRLKTKENPFTAKASLIRYWNKHIYNNIPQP 66
           TT+L   FL+   +S     + G ++T         NPFTAKASLIRYWNK I N +P+P
Sbjct: 11  TTILFVFFLYLSFTSFNVCFAEGKSSTGG-------NPFTAKASLIRYWNKQISNKLPKP 63

Query: 65  DFLISKASPLSAVDTAFFTKL 3
            FL+SKASPL+AVD+A  TKL
Sbjct: 64  SFLLSKASPLNAVDSAVLTKL 84


Top