BLASTX nr result

ID: Angelica22_contig00034534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034534
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254...    98   8e-19
emb|CBI32346.3| unnamed protein product [Vitis vinifera]               98   8e-19
ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II tra...    94   1e-17
ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra...    94   1e-17
ref|XP_002883436.1| hypothetical protein ARALYDRAFT_479868 [Arab...    94   1e-17

>ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera]
          Length = 1321

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/87 (56%), Positives = 58/87 (66%)
 Frame = +2

Query: 212 SKQETIWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENS 391
           S Q  +WDSV+ELTK AQ R +DPL WAVQ               E A L+V +ICW N+
Sbjct: 14  STQPGLWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANN 73

Query: 392 VPITWKFLEMALTMKILPPMLVLALLS 472
           VPITWKFLE A++ +I PPMLVLALLS
Sbjct: 74  VPITWKFLEKAVSGRIAPPMLVLALLS 100


>emb|CBI32346.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/87 (56%), Positives = 58/87 (66%)
 Frame = +2

Query: 212 SKQETIWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENS 391
           S Q  +WDSV+ELTK AQ R +DPL WAVQ               E A L+V +ICW N+
Sbjct: 65  STQPGLWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANN 124

Query: 392 VPITWKFLEMALTMKILPPMLVLALLS 472
           VPITWKFLE A++ +I PPMLVLALLS
Sbjct: 125 VPITWKFLEKAVSGRIAPPMLVLALLS 151


>ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like [Cucumis sativus]
          Length = 739

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/84 (51%), Positives = 57/84 (67%)
 Frame = +2

Query: 227 IWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENSVPITW 406
           +WD+V+ELTK AQ +  DPL WAVQ               E A+L+V +ICW+N VPI W
Sbjct: 17  LWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIMW 76

Query: 407 KFLEMALTMKILPPMLVLALLSVK 478
           KFLE A+T +I+PP+LV+ALLS +
Sbjct: 77  KFLEKAMTARIVPPLLVIALLSTR 100


>ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Cucumis sativus]
          Length = 1335

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/84 (51%), Positives = 57/84 (67%)
 Frame = +2

Query: 227 IWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENSVPITW 406
           +WD+V+ELTK AQ +  DPL WAVQ               E A+L+V +ICW+N VPI W
Sbjct: 17  LWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIMW 76

Query: 407 KFLEMALTMKILPPMLVLALLSVK 478
           KFLE A+T +I+PP+LV+ALLS +
Sbjct: 77  KFLEKAMTARIVPPLLVIALLSTR 100


>ref|XP_002883436.1| hypothetical protein ARALYDRAFT_479868 [Arabidopsis lyrata subsp.
           lyrata] gi|297329276|gb|EFH59695.1| hypothetical protein
           ARALYDRAFT_479868 [Arabidopsis lyrata subsp. lyrata]
          Length = 1309

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/85 (50%), Positives = 56/85 (65%)
 Frame = +2

Query: 218 QETIWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENSVP 397
           + T+WD VIELTK+AQ    DP  WA Q              TE A++IV YICW+N+VP
Sbjct: 6   RRTVWDCVIELTKMAQENCIDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVP 65

Query: 398 ITWKFLEMALTMKILPPMLVLALLS 472
           I WKFLE A+ +K++ P++VLALLS
Sbjct: 66  ILWKFLERAMALKLVSPLVVLALLS 90


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