BLASTX nr result
ID: Angelica22_contig00034534
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00034534 (478 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254... 98 8e-19 emb|CBI32346.3| unnamed protein product [Vitis vinifera] 98 8e-19 ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II tra... 94 1e-17 ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra... 94 1e-17 ref|XP_002883436.1| hypothetical protein ARALYDRAFT_479868 [Arab... 94 1e-17 >ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera] Length = 1321 Score = 97.8 bits (242), Expect = 8e-19 Identities = 49/87 (56%), Positives = 58/87 (66%) Frame = +2 Query: 212 SKQETIWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENS 391 S Q +WDSV+ELTK AQ R +DPL WAVQ E A L+V +ICW N+ Sbjct: 14 STQPGLWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANN 73 Query: 392 VPITWKFLEMALTMKILPPMLVLALLS 472 VPITWKFLE A++ +I PPMLVLALLS Sbjct: 74 VPITWKFLEKAVSGRIAPPMLVLALLS 100 >emb|CBI32346.3| unnamed protein product [Vitis vinifera] Length = 1388 Score = 97.8 bits (242), Expect = 8e-19 Identities = 49/87 (56%), Positives = 58/87 (66%) Frame = +2 Query: 212 SKQETIWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENS 391 S Q +WDSV+ELTK AQ R +DPL WAVQ E A L+V +ICW N+ Sbjct: 65 STQPGLWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANN 124 Query: 392 VPITWKFLEMALTMKILPPMLVLALLS 472 VPITWKFLE A++ +I PPMLVLALLS Sbjct: 125 VPITWKFLEKAVSGRIAPPMLVLALLS 151 >ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33B-like [Cucumis sativus] Length = 739 Score = 94.0 bits (232), Expect = 1e-17 Identities = 43/84 (51%), Positives = 57/84 (67%) Frame = +2 Query: 227 IWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENSVPITW 406 +WD+V+ELTK AQ + DPL WAVQ E A+L+V +ICW+N VPI W Sbjct: 17 LWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIMW 76 Query: 407 KFLEMALTMKILPPMLVLALLSVK 478 KFLE A+T +I+PP+LV+ALLS + Sbjct: 77 KFLEKAMTARIVPPLLVIALLSTR 100 >ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like [Cucumis sativus] Length = 1335 Score = 94.0 bits (232), Expect = 1e-17 Identities = 43/84 (51%), Positives = 57/84 (67%) Frame = +2 Query: 227 IWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENSVPITW 406 +WD+V+ELTK AQ + DPL WAVQ E A+L+V +ICW+N VPI W Sbjct: 17 LWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIMW 76 Query: 407 KFLEMALTMKILPPMLVLALLSVK 478 KFLE A+T +I+PP+LV+ALLS + Sbjct: 77 KFLEKAMTARIVPPLLVIALLSTR 100 >ref|XP_002883436.1| hypothetical protein ARALYDRAFT_479868 [Arabidopsis lyrata subsp. lyrata] gi|297329276|gb|EFH59695.1| hypothetical protein ARALYDRAFT_479868 [Arabidopsis lyrata subsp. lyrata] Length = 1309 Score = 93.6 bits (231), Expect = 1e-17 Identities = 43/85 (50%), Positives = 56/85 (65%) Frame = +2 Query: 218 QETIWDSVIELTKLAQHRVTDPLTWAVQXXXXXXXXXXXXXXTEAAKLIVDYICWENSVP 397 + T+WD VIELTK+AQ DP WA Q TE A++IV YICW+N+VP Sbjct: 6 RRTVWDCVIELTKMAQENCIDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVP 65 Query: 398 ITWKFLEMALTMKILPPMLVLALLS 472 I WKFLE A+ +K++ P++VLALLS Sbjct: 66 ILWKFLERAMALKLVSPLVVLALLS 90