BLASTX nr result

ID: Angelica22_contig00034530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034530
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   302   3e-80
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   296   1e-78
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   295   3e-78
gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]        295   4e-78
ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-...   294   6e-78

>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
            gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
            MSH2, putative [Ricinus communis]
          Length = 936

 Score =  302 bits (773), Expect = 3e-80
 Identities = 146/186 (78%), Positives = 165/186 (88%)
 Frame = -1

Query: 558  GEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTASDLDLAIDKSLKLEKGTQFGHVFRI 379
            GEY+ISPSYD  LS+LK EQESLE QI+ LH+QTA DLDL  DK LKL+KGTQFGHVFRI
Sbjct: 457  GEYLISPSYDPALSALKDEQESLECQIHNLHKQTAQDLDLPQDKGLKLDKGTQFGHVFRI 516

Query: 378  TKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGDQYQKIIDEYRKCQKEIVGRVVG 199
            TKKEEPK+RKKL T F+VLETRKDGVKFTN+KL+ LGDQYQKI++EY+ CQKE+V RVV 
Sbjct: 517  TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKIVEEYKNCQKELVNRVVQ 576

Query: 198  TTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRPDVTPSDEGDIILEGSRHPCVE 19
            T A+F EVF+ +A LLS+LDVLLSFADLA SCPTPYTRPD+TPSD G+IILEGSRHPCVE
Sbjct: 577  TAATFSEVFKSLAGLLSQLDVLLSFADLATSCPTPYTRPDITPSDVGNIILEGSRHPCVE 636

Query: 18   AQDWVN 1
            AQDWVN
Sbjct: 637  AQDWVN 642


>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
            gi|296034481|gb|ADG85112.1| mismatch repair protein
            [Solanum lycopersicum]
          Length = 943

 Score =  296 bits (759), Expect = 1e-78
 Identities = 143/186 (76%), Positives = 166/186 (89%)
 Frame = -1

Query: 558  GEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTASDLDLAIDKSLKLEKGTQFGHVFRI 379
            GEYMIS +YD  LS+LK EQE+LE QI+ LH+QTA+DLDL IDKSLKL+KGTQFGHVFRI
Sbjct: 461  GEYMISSAYDPNLSALKDEQETLEQQIHNLHKQTANDLDLPIDKSLKLDKGTQFGHVFRI 520

Query: 378  TKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGDQYQKIIDEYRKCQKEIVGRVVG 199
            TKKEEPKVR++LN+H++VLETRKDGVKFTN+KL+ LGD+YQKI+DEY+ CQKE+V RVV 
Sbjct: 521  TKKEEPKVRRQLNSHYIVLETRKDGVKFTNTKLKKLGDRYQKILDEYKSCQKELVARVVQ 580

Query: 198  TTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRPDVTPSDEGDIILEGSRHPCVE 19
            T ASF EVFEG+A  LSELDVLLSFADLA SCPT Y+RP+++P D GDIILEG RHPCVE
Sbjct: 581  TVASFSEVFEGLAGSLSELDVLLSFADLASSCPTAYSRPNISPPDTGDIILEGCRHPCVE 640

Query: 18   AQDWVN 1
            AQDWVN
Sbjct: 641  AQDWVN 646


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
            predicted protein [Populus trichocarpa]
          Length = 944

 Score =  295 bits (756), Expect = 3e-78
 Identities = 143/186 (76%), Positives = 163/186 (87%)
 Frame = -1

Query: 558  GEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTASDLDLAIDKSLKLEKGTQFGHVFRI 379
            GEYMISP Y+  L +LK EQESLE QI+ LH+QTASDLDL +DK LKL+KGTQ+GHVFRI
Sbjct: 463  GEYMISPGYEAALGALKAEQESLEHQIHNLHKQTASDLDLPLDKGLKLDKGTQYGHVFRI 522

Query: 378  TKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGDQYQKIIDEYRKCQKEIVGRVVG 199
            TKKEEPK+RKKL T F+VLETRKDGVKFTN+KL+ LGDQYQKI++ Y+  QKE+V RVV 
Sbjct: 523  TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKIVENYKSRQKELVSRVVQ 582

Query: 198  TTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRPDVTPSDEGDIILEGSRHPCVE 19
             TA+F EVFE ++ LLSE+DVLLSFADLA SCPTPYTRPD+TPSD GDIILEGSRHPCVE
Sbjct: 583  ITATFSEVFEKLSGLLSEMDVLLSFADLASSCPTPYTRPDITPSDVGDIILEGSRHPCVE 642

Query: 18   AQDWVN 1
            AQDWVN
Sbjct: 643  AQDWVN 648


>gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 942

 Score =  295 bits (754), Expect = 4e-78
 Identities = 141/186 (75%), Positives = 163/186 (87%)
 Frame = -1

Query: 558  GEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTASDLDLAIDKSLKLEKGTQFGHVFRI 379
            GEYMIS +YD  LS+LK EQE+LE  I+ LH+QTA+DLDL +DKSLKL+K T FGHVFRI
Sbjct: 461  GEYMISSAYDPNLSALKDEQETLERHIHNLHKQTANDLDLPVDKSLKLDKETTFGHVFRI 520

Query: 378  TKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGDQYQKIIDEYRKCQKEIVGRVVG 199
            TKKEEPK+RK+LN+H+++LETRKDGVKFTN+KL+ LGDQYQKI++EY+ CQKE+V RVV 
Sbjct: 521  TKKEEPKIRKQLNSHYIILETRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKELVARVVQ 580

Query: 198  TTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRPDVTPSDEGDIILEGSRHPCVE 19
            T ASF EVFEGIA  LSELDVLLS ADLA SCPTPYTRP++TP D GDIILEG RHPCVE
Sbjct: 581  TAASFSEVFEGIAGSLSELDVLLSLADLAASCPTPYTRPNITPPDTGDIILEGCRHPCVE 640

Query: 18   AQDWVN 1
            AQDWVN
Sbjct: 641  AQDWVN 646


>ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
            gi|449477104|ref|XP_004154930.1| PREDICTED: DNA mismatch
            repair protein MSH2-like [Cucumis sativus]
          Length = 938

 Score =  294 bits (753), Expect = 6e-78
 Identities = 141/186 (75%), Positives = 164/186 (88%)
 Frame = -1

Query: 558  GEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTASDLDLAIDKSLKLEKGTQFGHVFRI 379
            GEYMI+ SYD+ LS LK  QES+E QI  LH+Q A+DLDL +DK+LKL+KGTQFGHVFRI
Sbjct: 461  GEYMIASSYDDTLSKLKNVQESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRI 520

Query: 378  TKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLRILGDQYQKIIDEYRKCQKEIVGRVVG 199
            TKKEEPKVRKKL+THF+VLETRKDGVKFTN+KL+ LGDQYQKI++EY+ CQK++V RV+ 
Sbjct: 521  TKKEEPKVRKKLSTHFIVLETRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIE 580

Query: 198  TTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRPDVTPSDEGDIILEGSRHPCVE 19
            T +SF EVF  +A LLSELDVLL FADLA SCPTPYTRPD+T S+EG+IILEGSRHPCVE
Sbjct: 581  TASSFNEVFRPLAELLSELDVLLGFADLASSCPTPYTRPDITSSNEGNIILEGSRHPCVE 640

Query: 18   AQDWVN 1
            AQDWVN
Sbjct: 641  AQDWVN 646


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