BLASTX nr result

ID: Angelica22_contig00034490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034490
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncat...    62   1e-07
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    61   3e-07

>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
 Frame = +1

Query: 7   GYLPYPSNQEILAPTVEGSFHWLFD-DERKNITTLHAFNLEEEQHYQIPIPSNIK-NCNV 180
           G +P+P  ++    ++ G+ HW+ + D+ ++   + A +++ ++   +  P+  + +   
Sbjct: 224 GEIPFPDCKKFFGVSLNGALHWILNLDDYEDADLICALDIDSKKIRPMSPPNGFRRDTTE 283

Query: 181 MRVGVLHKCLCIFDNSVPGQFSIWSMKEYGVMESWSIECNL-NASIPGGLDASPLVPVAV 357
           M +GVL  CL I D+       IW MKEYGV +SW+ E  +   S+P  L  S L P+ V
Sbjct: 284 MTLGVLRDCLFICDSMTLYNLDIWVMKEYGVKDSWTKEIVIAKTSLPSNLQNSFLQPIMV 343

Query: 358 LKDKLLLFKSQNGGDFYTYDQKNTKFAK 441
            KD  +L  S +   F  YD  +  F K
Sbjct: 344 SKDGEVLI-SSDSNVFVWYDPGSKSFTK 370


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
 Frame = +1

Query: 37  ILAPTVEGSFHWLFDDERKNITTLHAFNLEEEQHYQIPIPSNIKNCNVMRVGVLHKCLCI 216
           I A  + GS HW+   + ++I++   F++E EQ   I +P  +        G L   LCI
Sbjct: 219 IRAVPLNGSLHWISTRDDRHISS---FDMENEQALSIALPDQVVMHTASLAG-LGNFLCI 274

Query: 217 FDNSVPGQFSIWSMKEYGVMESW---SIECNLNASIPGGLDASPLVPVAVLKDKLLLFKS 387
           FDN  P +F+IW MKEYGV ESW   +++ + N         S   PVA+ +D  +L   
Sbjct: 275 FDNEYP-EFNIWVMKEYGVEESWKHYTVKRSPN---------SHYRPVAIKEDASILL-I 323

Query: 388 QNGGDFYTYDQKNTKFAKFEIENMEVLGEFNGPIVHSSNFCPDKILATG 534
           QN     +YD K  +         + +G+     +H+ +  P K +  G
Sbjct: 324 QNSETLISYDPKTKESRAL----YDQIGDRRFVYIHTPSLVPLKDILIG 368


>ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355513532|gb|AES95155.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 380

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 29/90 (32%), Positives = 53/90 (58%)
 Frame = +1

Query: 19  YPSNQEILAPTVEGSFHWLFDDERKNITTLHAFNLEEEQHYQIPIPSNIKNCNVMRVGVL 198
           YP N++ L   V G+ +W+ D ER    T+ +F++E+E + Q+ +P +        + VL
Sbjct: 207 YPPNRKHLGKFVSGTLNWIVD-ERDGRATILSFDIEKETYRQVLLPQHGYAVYSPGLYVL 265

Query: 199 HKCLCIFDNSVPGQFSIWSMKEYGVMESWS 288
             C+C+  + +  ++ +W MK+YGV ESW+
Sbjct: 266 SNCICVCTSFLDTRWQLWMMKKYGVAESWT 295


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = +1

Query: 112 AFNLEEEQHYQIPIPSNIKNCNVMRVGVLHKCLCIFDNSVPGQFSIWSMKEYGVMESWSI 291
           AF+L  E+   IP P    N + M VGVL  CLC+F N    Q  IW MKEYGV ESW+ 
Sbjct: 242 AFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKESWTH 301

Query: 292 ECNLNASIPGGLDASPLVPVAVLK--DKLLLFKSQNGGDFYTYDQKNTK 432
            C + A +          P+A  K  DK+LL    +   F  YD +  K
Sbjct: 302 LCTVIAQLQVKAFWLHARPLAYSKGGDKILL--ELDNRFFVWYDLRRRK 348


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
 Frame = +1

Query: 52  VEGSFHWLFDDER-KNITTLHAFNLEEEQHYQIPIPS--NIKNCNVMRVGVLHKCLCIFD 222
           V G  HW+    R K    L +F+L +EQ  ++P P    +  C+   + VL  CL +  
Sbjct: 236 VNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCDY-HLAVLRGCLSVAV 294

Query: 223 NSVPGQFSIWSMKEYGVMESWSIECNLNASIPGGLDASPLVP---------------VAV 357
               G+  IW MKEY V ESW  E N+ A +P GL  + + P               + V
Sbjct: 295 YCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCV 354

Query: 358 LKDKLLLFKSQNGGDFYTYDQKNTKFAKFEIE 453
           LK+  +L + +N     +YD K  KF   +++
Sbjct: 355 LKNGEILLEYKNRA-LVSYDPKKGKFKDIDLQ 385


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