BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034300
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   104   8e-21
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   103   1e-20
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   103   1e-20
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   103   1e-20
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   103   1e-20

>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/105 (44%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
 Frame = +2

Query: 5   NRVQSWEGRLVSQAGREVLIKSVAQTLPTYAMSVFHIPLDIIKE-----PKYWWHSKGER 169
           +R+Q W+ +L+S+AG+E+LIK+VAQ++PTYAMS F +   +  E      +YWW  + + 
Sbjct: 355 SRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMSCFDLTKGLCDELSSIIGRYWWSQQDKA 414

Query: 170 NIGVHWMSWTRMSRHKSADGLGFRDFRDFNLAMLGKQG*RIMSNP 304
           N  +HW+SW ++++ K   GLGFRD   FNLAML +Q  R+++NP
Sbjct: 415 N-KIHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAWRLLTNP 458


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
 Frame = +2

Query: 5    NRVQSWEGRLVSQAGREVLIKSVAQTLPTYAMSVFHIPL---DIIKE--PKYWWHSKGER 169
            NRV  WEG+L+S+AG+EVLIK+VAQ +P Y MSVF +P    D I +   ++WW  +G +
Sbjct: 1062 NRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWGKEGGK 1121

Query: 170  NIGVHWMSWTRMSRHKSADGLGFRDFRDFNLAMLGKQG*RIMSNP 304
              G+HW  W+ +   K   GLGFRD   FN A+LGKQG R+M  P
Sbjct: 1122 --GIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYP 1164


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  103 bits (258), Expect = 1e-20
 Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 5/104 (4%)
 Frame = +2

Query: 8   RVQSWEGRLVSQAGREVLIKSVAQTLPTYAMSVFHIPLDIIKEPK-----YWWHSKGERN 172
           R+Q W+ +L+SQAG+++LIK V Q +P+Y MS F +P+ + +E +     +WW  K +  
Sbjct: 176 RLQGWQSKLLSQAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGG 235

Query: 173 IGVHWMSWTRMSRHKSADGLGFRDFRDFNLAMLGKQG*RIMSNP 304
             ++W+SW ++   K   GLGFR+ RDFNLAMLGKQG  +++ P
Sbjct: 236 RRINWLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLITKP 279


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/104 (46%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
 Frame = +2

Query: 8    RVQSWEGRLVSQAGREVLIKSVAQTLPTYAMSVFHIPLDIIKE-----PKYWWHSKGERN 172
            R+Q W+ +L+S+AG+E+LIK+VAQ +PT+AM  F +  D+  +      KYWW S  E++
Sbjct: 1031 RIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWW-SNQEKD 1089

Query: 173  IGVHWMSWTRMSRHKSADGLGFRDFRDFNLAMLGKQG*RIMSNP 304
              +HW+SW +++  K+  GLGFRD   FNLAML KQG R++ +P
Sbjct: 1090 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDP 1133


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/104 (46%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
 Frame = +2

Query: 8    RVQSWEGRLVSQAGREVLIKSVAQTLPTYAMSVFHIPLDIIKE-----PKYWWHSKGERN 172
            R+Q W+ +L+S+AG+E+LIK+VAQ +PT+AM  F +  D+  +      KYWW S  E++
Sbjct: 976  RIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWW-SNQEKD 1034

Query: 173  IGVHWMSWTRMSRHKSADGLGFRDFRDFNLAMLGKQG*RIMSNP 304
              +HW+SW +++  K+  GLGFRD   FNLAML KQG R++ +P
Sbjct: 1035 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDP 1078