BLASTX nr result

ID: Angelica22_contig00034067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034067
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
ref|XP_002513633.1| pentatricopeptide repeat-containing protein,...   117   1e-24
ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
ref|XP_003592182.1| Pentatricopeptide repeat-containing protein ...    93   2e-17

>ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
           gi|302143764|emb|CBI22625.3| unnamed protein product
           [Vitis vinifera]
          Length = 880

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/112 (56%), Positives = 76/112 (67%)
 Frame = +1

Query: 10  CSSLNSPSRTRELHGYIIKKNADQDIAVGNALVDAYAGLGMVNDAQRVIKMMAKRDVITY 189
           C ++ S ++TR+LHGYIIK NAD D+ VGNALVDAYAGLGMV+DA  V  MM  RDVITY
Sbjct: 429 CGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITY 488

Query: 190 TGLATRINQMGCHETALCIVNQILDDNIKMDGYXXXXXXXXXXXXXXMEPGK 345
           T LATRINQ G HE AL I+  +  D+++MDG+              ME GK
Sbjct: 489 TSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGK 540


>ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547541|gb|EEF49036.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 777

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/112 (50%), Positives = 77/112 (68%)
 Frame = +1

Query: 10  CSSLNSPSRTRELHGYIIKKNADQDIAVGNALVDAYAGLGMVNDAQRVIKMMAKRDVITY 189
           CS++ SP +T +LHG+IIK  AD D+ VGNALVDAYAG G V+DA RV+K M +RD ITY
Sbjct: 433 CSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITY 492

Query: 190 TGLATRINQMGCHETALCIVNQILDDNIKMDGYXXXXXXXXXXXXXXMEPGK 345
           T LATR+NQMG HE AL +++ + + ++K+DG+              +E GK
Sbjct: 493 TSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGK 544


>ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|222848907|gb|EEE86454.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/96 (58%), Positives = 74/96 (77%)
 Frame = +1

Query: 1   LWNCSSLNSPSRTRELHGYIIKKNADQDIAVGNALVDAYAGLGMVNDAQRVIKMMAKRDV 180
           L +C +  S S+  +LHG++IK NAD DIAV NALVDAYAG   V+DA  +I+ M++RD 
Sbjct: 351 LRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDA 410

Query: 181 ITYTGLATRINQMGCHETALCIVNQILDDNIKMDGY 288
           +TYTGLATR+NQMG HE AL ++N + +D+IKMDGY
Sbjct: 411 LTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGY 446


>ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  108 bits (271), Expect = 4e-22
 Identities = 56/112 (50%), Positives = 71/112 (63%)
 Frame = +1

Query: 10  CSSLNSPSRTRELHGYIIKKNADQDIAVGNALVDAYAGLGMVNDAQRVIKMMAKRDVITY 189
           CS + S  +T++LHGYIIK   D D+AVGNALVDAYAG GM ++A  VI MM  RD+ITY
Sbjct: 432 CSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITY 491

Query: 190 TGLATRINQMGCHETALCIVNQILDDNIKMDGYXXXXXXXXXXXXXXMEPGK 345
           T LA R+NQ G HE AL ++  + +D +KMD +              ME GK
Sbjct: 492 TTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGK 543


>ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481230|gb|AES62433.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 912

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/112 (47%), Positives = 64/112 (57%)
 Frame = +1

Query: 10  CSSLNSPSRTRELHGYIIKKNADQDIAVGNALVDAYAGLGMVNDAQRVIKMMAKRDVITY 189
           CS   S   T  LHG+IIK   D DIAV NALVD YAG+GM+++A  VI  M  RD ITY
Sbjct: 430 CSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITY 489

Query: 190 TGLATRINQMGCHETALCIVNQILDDNIKMDGYXXXXXXXXXXXXXXMEPGK 345
           T LA R+NQ G H  AL ++  + +D IKMD +              ME GK
Sbjct: 490 TCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGK 541


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