BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00034015
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   144   1e-32
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              141   1e-31
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   136   3e-30
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   127   2e-27
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   124   2e-26

>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  144 bits (363), Expect = 1e-32
 Identities = 76/157 (48%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
 Frame = +1

Query: 142 MDYDYAE-QEVTSGFLSSITFGIVTEEDVEKMSVKEIEVPNDVIHPTLGIPSPMSSQCLT 318
           MD D+ E Q+V SG L  I F + TEED+EK+SV +I+  N++  P LG+P+P S QC T
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNP-SCQCST 59

Query: 319 CDAKNIKTCEGHFGFIKFPHSILHPYFISDVAKILNRICVGCKSERTRTKSASSPSTNKK 498
           C AK+ K CEGHFG IKFP +ILHPYF+++V +ILN+IC GCKS R             K
Sbjct: 60  CGAKDTKKCEGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTR--------QGQWVK 111

Query: 499 HGRSSSTNKKHGLCKYCDGHLKDQYPRTIFKLSSKEI 609
              S S   +   CKYC  +  D YP   FK+SSK++
Sbjct: 112 GADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDL 148


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  141 bits (355), Expect = 1e-31
 Identities = 75/157 (47%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
 Frame = +1

Query: 142 MDYDYAE-QEVTSGFLSSITFGIVTEEDVEKMSVKEIEVPNDVIHPTLGIPSPMSSQCLT 318
           MD D+ E Q+V SG L  I F + TEED+EK+SV +I+  N++  P LG+P+P S QC T
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNP-SCQCST 59

Query: 319 CDAKNIKTCEGHFGFIKFPHSILHPYFISDVAKILNRICVGCKSERTRTKSASSPSTNKK 498
           C AK+ K CEGHFG IKFP +ILHPYF+++V +ILN+IC GCKS R             +
Sbjct: 60  CGAKDTKKCEGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTR------QGQWVKVR 113

Query: 499 HGRSSSTNKKHGLCKYCDGHLKDQYPRTIFKLSSKEI 609
             RS         CKYC  +  D YP   FK+SSK++
Sbjct: 114 RLRSKG-------CKYCAANSNDWYPTMKFKVSSKDL 143


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  136 bits (343), Expect = 3e-30
 Identities = 67/155 (43%), Positives = 97/155 (62%)
 Frame = +1

Query: 145 DYDYAEQEVTSGFLSSITFGIVTEEDVEKMSVKEIEVPNDVIHPTLGIPSPMSSQCLTCD 324
           D    E  + SG L+ I F +  ++D+E ++V  ++  N+V  P LG+P+P S QC TC 
Sbjct: 3   DEQDGELPIPSGLLTGINFSVSNQQDIENIAVITVDAANEVSDPKLGLPNP-SYQCTTCG 61

Query: 325 AKNIKTCEGHFGFIKFPHSILHPYFISDVAKILNRICVGCKSERTRTKSASSPSTNKKHG 504
           A ++K CEGHFG IKFP++I+HPYF+S+VA++LN++C GCKS R            K   
Sbjct: 62  ASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSVRQEL-------WGKVED 114

Query: 505 RSSSTNKKHGLCKYCDGHLKDQYPRTIFKLSSKEI 609
            +S  N+  G C+YC G LKD YP   FKLS+ ++
Sbjct: 115 PTSDYNRPKG-CRYCFGSLKDWYPPMRFKLSTTDM 148


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  127 bits (319), Expect = 2e-27
 Identities = 76/190 (40%), Positives = 99/190 (52%), Gaps = 34/190 (17%)
 Frame = +1

Query: 142 MDYDYAE-QEVTSGFLSSITFGIVTEEDVEKMSVKEIEVPNDVIHPTLGIPSPMSSQCLT 318
           MD D+ E Q+V SG L  I F + TEED+EK+SV +I+  N++  P LG+P+P S QC T
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNP-SCQCST 59

Query: 319 CDAKNIKTCEG---------------------------------HFGFIKFPHSILHPYF 399
           C AK+ K CEG                                 HFG IKFP +ILHPYF
Sbjct: 60  CGAKDTKKCEGAVRQVIQKLYLLMISCYLYFLEYAKLXLFIFLGHFGVIKFPFTILHPYF 119

Query: 400 ISDVAKILNRICVGCKSERTRTKSASSPSTNKKHGRSSSTNKKHGLCKYCDGHLKDQYPR 579
           +++V +ILN+IC GCKS R             K   S S   +   CKYC  +  D YP 
Sbjct: 120 LTEVVQILNKICPGCKSTR--------QGQWVKGADSGSRRLRSKGCKYCAANSNDWYPT 171

Query: 580 TIFKLSSKEI 609
             FK+SSK++
Sbjct: 172 MKFKVSSKDL 181


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 1517

 Score =  124 bits (310), Expect = 2e-26
 Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 30/186 (16%)
 Frame = +1

Query: 142 MDYDYAE-QEVTSGFLSSITFGIVTEEDVEKMSVKEIEVPNDVIHPTLGIPSPMSSQCLT 318
           M+ D++E Q+V S  ++ + FG++TE + EK+SV  I+  ++V  P LG+P+P SSQC T
Sbjct: 1   MEIDFSEEQQVPSALITGMAFGVLTEAETEKLSVLNIDAVSEVTDPKLGLPNP-SSQCST 59

Query: 319 CDAKNIKTCEG-----------------------------HFGFIKFPHSILHPYFISDV 411
           C ++++K+CEG                             HFG I FP++I+HPYF+S+V
Sbjct: 60  CGSRDLKSCEGIVDVDLNSADRLASIATGDCANILLSLSGHFGVINFPYTIVHPYFLSEV 119

Query: 412 AKILNRICVGCKSERTRTKSASSPSTNKKHGRSSSTNKKHGLCKYCDGHLKDQYPRTIFK 591
            +ILN+IC GCKS   R   A+   T +   R          CKYC G+    YP   FK
Sbjct: 120 VQILNKICPGCKS--IRLAKATELITKENPQRKG--------CKYCAGNSLGWYPPMKFK 169

Query: 592 LSSKEI 609
           +SSKEI
Sbjct: 170 VSSKEI 175