BLASTX nr result

ID: Angelica22_contig00033962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033962
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19395.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   135   3e-30
emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]   131   5e-29
ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...   110   9e-23
ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Gly...   110   2e-22

>emb|CBI19395.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/96 (69%), Positives = 74/96 (77%), Gaps = 6/96 (6%)
 Frame = -3

Query: 274 DIGGIACRRVEDSSKPFSGYAPVFWTSDTTFIESPFSPEENYIYDSRTHLRPPEALDYIH 95
           DIGGIACR + DSSKP SGY+PVFWTS TTF+E+PFSPEE Y+YDSR HLRP    D+IH
Sbjct: 249 DIGGIACRTIGDSSKPLSGYSPVFWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIH 308

Query: 94  ------GDEAVSRILYINSSYDLVIPDLAETSVNPR 5
                  +E VS IL INSSYDLVIPDLA TS NPR
Sbjct: 309 EHHPLTENEVVSHILCINSSYDLVIPDLAGTSANPR 344


>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/96 (69%), Positives = 74/96 (77%), Gaps = 6/96 (6%)
 Frame = -3

Query: 274 DIGGIACRRVEDSSKPFSGYAPVFWTSDTTFIESPFSPEENYIYDSRTHLRPPEALDYIH 95
           DIGGIACR + DSSKP SGY+PVFWTS TTF+E+PFSPEE Y+YDSR HLRP    D+IH
Sbjct: 327 DIGGIACRTIGDSSKPLSGYSPVFWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIH 386

Query: 94  ------GDEAVSRILYINSSYDLVIPDLAETSVNPR 5
                  +E VS IL INSSYDLVIPDLA TS NPR
Sbjct: 387 EHHPLTENEVVSHILCINSSYDLVIPDLAGTSANPR 422


>emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]
          Length = 469

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/95 (68%), Positives = 72/95 (75%), Gaps = 6/95 (6%)
 Frame = -3

Query: 274 DIGGIACRRVEDSSKPFSGYAPVFWTSDTTFIESPFSPEENYIYDSRTHLRPPEALDYIH 95
           DIGGIACR + DSSKP S Y+PVFWTS TTF+E+PFSPEE Y+YDSR HLRP    D+IH
Sbjct: 327 DIGGIACRTIGDSSKPLSXYSPVFWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIH 386

Query: 94  G------DEAVSRILYINSSYDLVIPDLAETSVNP 8
                  +E VS IL INSSYDLVIPDLA TS NP
Sbjct: 387 XHHPLTENEVVSHILCINSSYDLVIPDLAGTSANP 421


>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
           gi|449482721|ref|XP_004156384.1| PREDICTED: F-box
           protein At3g12350-like [Cucumis sativus]
          Length = 465

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/95 (57%), Positives = 71/95 (74%), Gaps = 5/95 (5%)
 Frame = -3

Query: 274 DIGGIACRRVEDSSKPFSGYAPVFWTSDTTFIESPFSPEENYIYDSRTHLRPPEALDYIH 95
           DIGGIACR+V DSS+  S YAPVFWTS+TTF+E+PFS EE Y++D R H++P  A D   
Sbjct: 330 DIGGIACRKVGDSSERLSSYAPVFWTSNTTFLEAPFSVEEEYLHDCRIHVQPLAANDIDE 389

Query: 94  -----GDEAVSRILYINSSYDLVIPDLAETSVNPR 5
                 ++ +SRIL +NSSYDLV+PDLA ++ NPR
Sbjct: 390 LVPSIENKNISRILCVNSSYDLVLPDLAGSAPNPR 424


>ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 444

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/109 (55%), Positives = 71/109 (65%), Gaps = 19/109 (17%)
 Frame = -3

Query: 274 DIGGIACRRVEDSSKPFSGYAPVFWTSDTTFIESPFSPEENYIYDSRTHLRP-------- 119
           DIGGIACRR+ D    FSG+APVFWTS+ TF+ESPFSPEE  +YDSR HLRP        
Sbjct: 292 DIGGIACRRIGDPPDRFSGHAPVFWTSNATFLESPFSPEEESLYDSRVHLRPLQPGNEVL 351

Query: 118 -------PEALDYIH----GDEAVSRILYINSSYDLVIPDLAETSVNPR 5
                   E ++ I      D  V RIL+I+SSYDLV+PDLA T +NPR
Sbjct: 352 EQFPFSDSEVVNQIQQFQLSDNVVDRILHISSSYDLVVPDLAGT-LNPR 399


Top