BLASTX nr result

ID: Angelica22_contig00033900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033900
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...    69   7e-10
ref|XP_004136001.1| PREDICTED: transcription initiation factor T...    68   1e-09
ref|XP_002515305.1| Transcription initiation factor TFIID subuni...    65   6e-09
ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]            64   2e-08

>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 36/63 (57%), Positives = 41/63 (65%)
 Frame = -2

Query: 541 MNNSASGSSSKTRVGLSQQSEPSFKRKRAVFQKDSK*FVV*KYSFWLNATVQHMMYGFGD 362
           MNN ++G SSK++VG SQ SE SFKRKR VFQKD                +QHMMYGFGD
Sbjct: 1   MNNLSAGPSSKSKVGTSQPSETSFKRKRGVFQKD----------------LQHMMYGFGD 44

Query: 361 DPN 353
           DPN
Sbjct: 45  DPN 47


>ref|XP_004136001.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 1 [Cucumis sativus]
           gi|449436443|ref|XP_004136002.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Cucumis sativus]
           gi|449507844|ref|XP_004163145.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Cucumis sativus]
           gi|449507847|ref|XP_004163146.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Cucumis sativus]
          Length = 135

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/63 (57%), Positives = 40/63 (63%)
 Frame = -2

Query: 541 MNNSASGSSSKTRVGLSQQSEPSFKRKRAVFQKDSK*FVV*KYSFWLNATVQHMMYGFGD 362
           MNNS++G SSK R G SQ SE SFKRKR VFQK+                +QHMMYGFGD
Sbjct: 1   MNNSSAGPSSKQRTGSSQPSETSFKRKRGVFQKE----------------LQHMMYGFGD 44

Query: 361 DPN 353
           DPN
Sbjct: 45  DPN 47


>ref|XP_002515305.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223545785|gb|EEF47289.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 128

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 35/63 (55%), Positives = 41/63 (65%)
 Frame = -2

Query: 541 MNNSASGSSSKTRVGLSQQSEPSFKRKRAVFQKDSK*FVV*KYSFWLNATVQHMMYGFGD 362
           M++S +G SSK++VG SQ SE SFKRKR VFQKD                +QHMMYGFGD
Sbjct: 1   MSSSFTGPSSKSKVGSSQPSETSFKRKRGVFQKD----------------LQHMMYGFGD 44

Query: 361 DPN 353
           DPN
Sbjct: 45  DPN 47


>ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|222861085|gb|EEE98627.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 36/64 (56%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = -2

Query: 541 MNNSASGSSSKTRVGLSQQ-SEPSFKRKRAVFQKDSK*FVV*KYSFWLNATVQHMMYGFG 365
           MNNS++GSSSK++ G S Q SE SFKRKR +FQKD                +QHMMYGFG
Sbjct: 1   MNNSSTGSSSKSKAGSSSQPSETSFKRKRGMFQKD----------------LQHMMYGFG 44

Query: 364 DDPN 353
           DDPN
Sbjct: 45  DDPN 48


>gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]
          Length = 128

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/63 (53%), Positives = 39/63 (61%)
 Frame = -2

Query: 541 MNNSASGSSSKTRVGLSQQSEPSFKRKRAVFQKDSK*FVV*KYSFWLNATVQHMMYGFGD 362
           MNN+++G SSK RVG SQ SE S KRKR +FQKD                +QHMMYGFGD
Sbjct: 1   MNNTSAGPSSKARVGASQPSESSLKRKRGMFQKD----------------LQHMMYGFGD 44

Query: 361 DPN 353
           D N
Sbjct: 45  DSN 47


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