BLASTX nr result

ID: Angelica22_contig00033592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033592
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    79   3e-13
ref|XP_003594394.1| F-box protein [Medicago truncatula] gi|35548...    73   3e-11
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...    72   4e-11
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    72   4e-11
dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]            72   4e-11

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
 Frame = +3

Query: 3   DHVNDDYKIFKVAQFQQQNPFKYLGIMVVVYSLKSNKWTEIQNVPNNFSLITHLGMFKNG 182
           D V DDYK+ ++AQF       +    V VYSL+   W  I ++P         G+F NG
Sbjct: 154 DSVRDDYKLVRIAQFGGGGKRSFES-EVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANG 212

Query: 183 SLYWLANRYSVDFNHRTILCFDLGLEQFKEFRFPTANNGNFSVPTG---GSFCILDNCMN 353
           +L+W+            ++  DLG+E ++E   P   + NF +  G   G  C L N + 
Sbjct: 213 ALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLG 272

Query: 354 SRMDVWMVDNHGAENPW 404
            R+DVWM+  +G +  W
Sbjct: 273 ERVDVWMMKEYGVKESW 289


>ref|XP_003594394.1| F-box protein [Medicago truncatula] gi|355483442|gb|AES64645.1|
           F-box protein [Medicago truncatula]
          Length = 418

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
 Frame = +3

Query: 3   DHVNDDYKIFKVAQFQQ-QNPFKYLGIMVVVYSLKSNKWTEIQNVPNNFSLITHLGMF-- 173
           D V+ DYK+ +++     QNPF      V ++SLK+N W  I N+P +      +G+F  
Sbjct: 173 DSVSGDYKLLRISNLLDLQNPF--YDPHVRLFSLKTNSWKVIPNLPYSLYYALTMGVFVE 230

Query: 174 KNGSLYWLANRYSVDFNHRTILCFDLGLEQFKEFRFPT-----ANNGNFSVPT---GGSF 329
            + SL+W+A R    F    IL F+L LE F E   P       N+ +F +     GG  
Sbjct: 231 NSSSLHWVATRKVQLFQPDLILAFNLTLETFNEVPLPDEIEEEVNSKSFKIRVAALGGCL 290

Query: 330 CILDNCMNSRMDVWMVDNHGAENPW 404
           C++ +  ++++DVW++  +G    W
Sbjct: 291 CMIVDYKDTKIDVWVMKEYGCRESW 315


>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
           gi|145333023|ref|NP_001078377.1| F-box protein CPR30
           [Arabidopsis thaliana]
           gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
           protein CPR30; AltName: Full=Protein CONSTITUTIVE
           EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
           F-box protein CPR30 [Arabidopsis thaliana]
           gi|332657748|gb|AEE83148.1| F-box protein CPR30
           [Arabidopsis thaliana]
          Length = 413

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
 Frame = +3

Query: 3   DHVNDDYKIFKVAQFQQQNPFKYLGIM----VVVYSLKSNKWTEIQNVPNNFSLITHL-- 164
           D V+DDYK+ ++ QF+  +  + LG      V V+SLK N W  I++V ++  L+ +   
Sbjct: 145 DSVSDDYKVVRMVQFKIDSEDE-LGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYY 203

Query: 165 --------GMFKNGSLYWLANRYSVDFNHRTILCFDLGLEQFKEFRFPTA-NNGNFSVP- 314
                   G+    SL+W+  R         I+ FDL LE+F+  RFP A  NGN  +  
Sbjct: 204 HLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQM 263

Query: 315 ----TGGSFCILDNCMNSRMDVWMVDNHGAENPW 404
                 G  C++ N   S +DVWM+  +   + W
Sbjct: 264 DIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSW 297


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
 Frame = +3

Query: 3   DHVNDDYKIFKVAQFQQQNPFKYLGIMVVVYSLKSNKWTEIQNVPNNFSLITHLGMFKNG 182
           DHVN+DYK+  VA F   + + ++   V VYS+ +N W +IQ+ P+ FS   + G F +G
Sbjct: 197 DHVNEDYKV--VAVFCDPSEY-FIECKVKVYSMATNSWRKIQDFPHGFSPFQNSGKFVSG 253

Query: 183 SLYWLANRYSVDFNHRTILCFDLGLEQFKEFRFPTANNGNFSVP----TGGSFCILDNCM 350
           +L W AN      +   I+  DL  E ++E   P     + S P      G  C+  +  
Sbjct: 254 TLNWAANHSIGSSSLWVIVSLDLHKETYREVLPPDYEKEDCSTPGLGVLQGCLCMNYDYK 313

Query: 351 NSRMDVWMVDNHGAENPW 404
            +   VWM+ ++GA   W
Sbjct: 314 KTHFVVWMMKDYGARESW 331


>dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]
          Length = 413

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
 Frame = +3

Query: 3   DHVNDDYKIFKVAQFQQQNPFKYLGIM----VVVYSLKSNKWTEIQNVPNNFSLITHL-- 164
           D V+DDYK+ ++ QF+  +  + LG      V V+SLK N W  I++V ++  L+ +   
Sbjct: 145 DSVSDDYKVVRMVQFKIDSEDE-LGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYY 203

Query: 165 --------GMFKNGSLYWLANRYSVDFNHRTILCFDLGLEQFKEFRFPTA-NNGNFSVP- 314
                   G+    SL+W+  R         I+ FDL LE+F+  RFP A  NGN  +  
Sbjct: 204 HLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQM 263

Query: 315 ----TGGSFCILDNCMNSRMDVWMVDNHGAENPW 404
                 G  C++ N   S +DVWM+  +   + W
Sbjct: 264 DIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSW 297


Top