BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033552
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...   123   2e-26
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   114   1e-23
ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arab...   111   5e-23
gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]   110   1e-22
ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana] gi|...   110   1e-22

>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320679|gb|EFH51101.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 4/130 (3%)
 Frame = -3

Query: 383 PPA---NRTRNWQELPVELTALILKRLSTVDLVLSARQVCHTWRHVCSDPSLYRVVDLWF 213
           PPA     +RNW ELP ELT+LIL RL  ++++ +A++VC +WR VC DPS++R +D+  
Sbjct: 7   PPAMEVGESRNWTELPPELTSLILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHN 66

Query: 212 TGDPCKVNFNVDYVARRAVALSRGEMIEFSISYFGDDHLLNYISKRSSQLRCLNLASCN- 36
            GD   + FN+D + R AV  S+G ++E  I YFG D LLNYI+ RSS LR L L  C+ 
Sbjct: 67  LGDLEDMEFNLDIMCRHAVDRSQGGLVEIDIWYFGTDGLLNYIADRSSNLRSLRLTRCSQ 126

Query: 35  ITPEGLSQMV 6
           IT +GL + V
Sbjct: 127 ITDDGLVEAV 136


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/121 (47%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
 Frame = -3

Query: 365 RNWQELPVELTALILKRLSTVDLVLSARQVCHTWRHVCSDPSLYRVVDLWFTGDPCKVNF 186
           RNW ELP ELT+ IL RL T+D++ +A++VC +WR VC DPS++R +D+   GD   + +
Sbjct: 345 RNWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDMDNLGDLGAMGY 404

Query: 185 NVDYVARRAVALSRGEMIEFSISYFGDDHLLNYISKRSSQLRCLNLASC-NITPEGLSQM 9
           +++ + R AV  S+G ++E  I YFG D LLNYI+ RSS LR L L  C  I  EG  + 
Sbjct: 405 DLEIMCRHAVDRSQGGLVEIDIWYFGTDELLNYIADRSSNLRTLRLIMCYPIADEGFIEA 464

Query: 8   V 6
           V
Sbjct: 465 V 465



 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/129 (41%), Positives = 82/129 (63%), Gaps = 9/129 (6%)
 Frame = -3

Query: 365 RNWQELPVELTALILKRLSTVDLVLSARQVCHTWRHVCSDPSLYRVVDLWFTGDPCKVNF 186
           RNW ELP ELT+ IL RL  V+++ +A++VC +WR VC DPS++R + +  +G+     +
Sbjct: 7   RNWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNRDIFKY 66

Query: 185 NVDYVARRAVALSRGEMIEFSISYFGDDHLLNYISKR--------SSQLRCLNLASCN-I 33
           ++D + R AV  S+G ++E  I YFG D LL+YI+ R        SS LR L L  C+ I
Sbjct: 67  DLDSMCRHAVDRSQGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLVRCHQI 126

Query: 32  TPEGLSQMV 6
           T +G+++ V
Sbjct: 127 TDKGVAEAV 135


>ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp.
           lyrata] gi|297309088|gb|EFH39513.1| hypothetical protein
           ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/121 (46%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
 Frame = -3

Query: 365 RNWQELPVELTALILKRLSTVDLVLSARQVCHTWRHVCSDPSLYRVVDLWFTGDPCKVNF 186
           RNW ELP ELT  IL RL  +D++ +A++VC +WR V  DP ++R +D+ + GD   + +
Sbjct: 16  RNWAELPSELTFSILNRLGAIDILENAQKVCTSWRRVSLDPLMWRKIDMHYLGDMGSMIY 75

Query: 185 NVDYVARRAVALSRGEMIEFSISYFGDDHLLNYISKRSSQLRCLNLASCN-ITPEGLSQM 9
           + + + R AV  S+G ++E  I +FG D LLNYI+ RSS LR L LA CN IT EG+++ 
Sbjct: 76  DFESMCRHAVDRSQGGLVEIDIWHFGTDDLLNYIADRSSNLRSLRLAMCNQITDEGVTEA 135

Query: 8   V 6
           V
Sbjct: 136 V 136


>gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]
          Length = 302

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/131 (42%), Positives = 84/131 (64%), Gaps = 5/131 (3%)
 Frame = -3

Query: 383 PPA----NRTRNWQELPVELTALILKRLSTVDLVLSARQVCHTWRHVCSDPSLYRVVDLW 216
           PPA      + NW ELP ELT+ IL RL  ++++ +A++VC +WR VC DPS++R +D+ 
Sbjct: 7   PPAAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMH 66

Query: 215 FTGDPCKVNFNVDYVARRAVALSRGEMIEFSISYFGDDHLLNYISKRSSQLRCLNLASCN 36
             GD   +++N++ + R AV  S+G +++  I YFG   LLNYI+ RSS LR L L  C+
Sbjct: 67  NLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCS 126

Query: 35  -ITPEGLSQMV 6
            IT +G  + V
Sbjct: 127 QITDDGFVEAV 137


>ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana]
           gi|75335768|sp|Q9M0U9.1|SKI19_ARATH RecName: Full=F-box
           protein SKIP19; AltName: Full=F-box/LRR-repeat protein
           20; AltName: Full=SKP1-interacting partner 19
           gi|7267306|emb|CAB81088.1| N7 like-protein [Arabidopsis
           thaliana] gi|27765050|gb|AAO23646.1| At4g05460
           [Arabidopsis thaliana] gi|110742947|dbj|BAE99368.1| N7
           like-protein [Arabidopsis thaliana]
           gi|332657123|gb|AEE82523.1| F-box protein SKIP19
           [Arabidopsis thaliana]
          Length = 302

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/131 (42%), Positives = 84/131 (64%), Gaps = 5/131 (3%)
 Frame = -3

Query: 383 PPA----NRTRNWQELPVELTALILKRLSTVDLVLSARQVCHTWRHVCSDPSLYRVVDLW 216
           PPA      + NW ELP ELT+ IL RL  ++++ +A++VC +WR VC DPS++R +D+ 
Sbjct: 7   PPAAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMH 66

Query: 215 FTGDPCKVNFNVDYVARRAVALSRGEMIEFSISYFGDDHLLNYISKRSSQLRCLNLASCN 36
             GD   +++N++ + R AV  S+G +++  I YFG   LLNYI+ RSS LR L L  C+
Sbjct: 67  NLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCS 126

Query: 35  -ITPEGLSQMV 6
            IT +G  + V
Sbjct: 127 QITDDGFVEAV 137