BLASTX nr result

ID: Angelica22_contig00033437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033437
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96192.2| retrotransposon protein, putative, Ty1-copia subc...   148   6e-34
emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group]         147   1e-33
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]        142   4e-32
ref|XP_002442065.1| hypothetical protein SORBIDRAFT_08g008672 [S...   142   5e-32
gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]     142   5e-32

>gb|ABA96192.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1328

 Score =  148 bits (374), Expect = 6e-34
 Identities = 78/205 (38%), Positives = 116/205 (56%), Gaps = 22/205 (10%)
 Frame = -1

Query: 557  AMARSMLSERKMPEKY*GEAVRYAVYVLNKFPTRSMSMVTPYEAWFERKPSVDYLKIFGC 378
            A ARSML  +K+P  + GEA   AVY+LN+ PT+S+  +TP+EAW+ +KP+  +L  FGC
Sbjct: 649  AAARSMLKAKKLPRYFWGEAAATAVYLLNRLPTKSVEGMTPFEAWYGKKPAAHHLHTFGC 708

Query: 377  IAYMKVPAPLTKKLGNRSKKLVHIGREPGTKAYRLFDPISGSVHISRDVTFDESKGWNW- 201
            IA++K  +P  KKL +RS K++ +G EPGTKAYR ++P +G VHI+RDV FDE+  W+W 
Sbjct: 709  IAHVKNTSPHLKKLDDRSTKMIFVGYEPGTKAYRAYNPATGRVHITRDVVFDEAAQWDWG 768

Query: 200  ATNTNAASPSTNQWEIDF------------SSDQPQTPKTPSTPVSTHTTDITDLEFSTT 57
            A   N  +     +E++F            ++  P T   P T     T     +E +T 
Sbjct: 769  AAAANFDNTEAEPFEVEFMAVPFVEPTDDVAAASPPTSPAPGTAAGGRTPSPAPVELATP 828

Query: 56   SDS---------SEQPKRYRTLADI 9
              S          E P R+R + ++
Sbjct: 829  PSSQGDLDADHGDEAPLRFRRINNV 853


>emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group]
          Length = 1403

 Score =  147 bits (371), Expect = 1e-33
 Identities = 74/152 (48%), Positives = 99/152 (65%)
 Frame = -1

Query: 554  MARSMLSERKMPEKY*GEAVRYAVYVLNKFPTRSMSMVTPYEAWFERKPSVDYLKIFGCI 375
            MARS+L  + MP +Y GEAV  AV++LN+ PT+S++ +TPYEAW  +KP+V YL+ FGC+
Sbjct: 698  MARSLLKAKNMPARYWGEAVTTAVFLLNRAPTKSLANMTPYEAWHGKKPAVGYLRTFGCL 757

Query: 374  AYMKVPAPLTKKLGNRSKKLVHIGREPGTKAYRLFDPISGSVHISRDVTFDESKGWNWAT 195
            AY+K   P   KL +RSK +V IG   G KAY++FDP+SG V +SRDV FDE  GW+W  
Sbjct: 758  AYVKDVRPHLPKLSDRSKPMVLIGYADGAKAYKVFDPVSGRVQVSRDVIFDEGAGWDWDA 817

Query: 194  NTNAASPSTNQWEIDFSSDQPQTPKTPSTPVS 99
               AA P       DF+ +   T  +PS   S
Sbjct: 818  AGAAAVPGGGGCS-DFTVEYLTTGTSPSASTS 848


>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
          Length = 1425

 Score =  142 bits (358), Expect = 4e-32
 Identities = 82/204 (40%), Positives = 120/204 (58%), Gaps = 21/204 (10%)
 Frame = -1

Query: 557  AMARSMLSERKMPEKY*GEAVRYAVYVLNKFPTRSMSMVTPYEAWFERKPSVDYLKIFGC 378
            A ARSML    +P ++ GEAV  AVYVLN+ PT+++  VTPYEAW  R+PSV++L++FGC
Sbjct: 689  AAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGC 748

Query: 377  IAYMKVPAPLTKKLGNRSKKLVHIGREPGTKAYRLFDPISGSVHISRDVTFDESKGWNWA 198
            + Y+K   P  +KL +R  ++V IG E G+KAYR++DP++  V +SRDV FDE+  W W 
Sbjct: 749  VGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVSRDVVFDETATWAWR 808

Query: 197  TNTNAASPSTNQWEIDF-----------SSDQPQTP-KTPSTPVSTHTTD----ITDLEF 66
               +AA+    ++ +DF           + +Q  TP +   +PVST          + EF
Sbjct: 809  DPEDAAT-EEEEFTVDFFVSPVAPSVADAGEQTGTPVQAGVSPVSTGVLSSPPRAPNGEF 867

Query: 65   -----STTSDSSEQPKRYRTLADI 9
                 S T ++   P RYR + DI
Sbjct: 868  CTPPTSVTPETDGGPVRYRRVQDI 891


>ref|XP_002442065.1| hypothetical protein SORBIDRAFT_08g008672 [Sorghum bicolor]
           gi|241942758|gb|EES15903.1| hypothetical protein
           SORBIDRAFT_08g008672 [Sorghum bicolor]
          Length = 831

 Score =  142 bits (357), Expect = 5e-32
 Identities = 75/172 (43%), Positives = 105/172 (61%)
 Frame = -1

Query: 551 ARSMLSERKMPEKY*GEAVRYAVYVLNKFPTRSMSMVTPYEAWFERKPSVDYLKIFGCIA 372
           ARSM+  + +P  + GEAV  AVY+LN+   +++   TPYE W    P+V +L+ FGCIA
Sbjct: 83  ARSMMKAKSLPGVFWGEAVSTAVYLLNRSSCKAIGGRTPYELWNGHTPAVQHLRTFGCIA 142

Query: 371 YMKVPAPLTKKLGNRSKKLVHIGREPGTKAYRLFDPISGSVHISRDVTFDESKGWNWATN 192
           + KV  P  KKL +RS++ V IG EPG+KAYR++DP +  VHISRDV FDE+  W W T 
Sbjct: 143 HTKVTTPHQKKLDDRSRRTVFIGYEPGSKAYRVYDPTTRRVHISRDVVFDEAAAWAW-TG 201

Query: 191 TNAASPSTNQWEIDFSSDQPQTPKTPSTPVSTHTTDITDLEFSTTSDSSEQP 36
           TN A P       DF+ ++P  P++ S   +T TT +      +TS +   P
Sbjct: 202 TNPAEPD------DFTVEEPDDPES-SVITTTRTTTVVHPSSGSTSPAPSAP 246


>gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1332

 Score =  142 bits (357), Expect = 5e-32
 Identities = 77/183 (42%), Positives = 110/183 (60%)
 Frame = -1

Query: 557  AMARSMLSERKMPEKY*GEAVRYAVYVLNKFPTRSMSMVTPYEAWFERKPSVDYLKIFGC 378
            AMARS+L  ++MP ++ GE V  AV++LN+ PTR++  +TPYEAW+ R+P+V Y + FGC
Sbjct: 621  AMARSLLKAKEMPGRFWGEVVVTAVHILNRSPTRALDGLTPYEAWYGRRPNVHYFRTFGC 680

Query: 377  IAYMKVPAPLTKKLGNRSKKLVHIGREPGTKAYRLFDPISGSVHISRDVTFDESKGWNWA 198
            +AY+K   P   KL +RSK +V +G E G+KAYR+FD ++  VH+SRDV FDE   W+WA
Sbjct: 681  VAYVKNVRPHLSKLEDRSKAMVFLGYEDGSKAYRVFDLVTNRVHVSRDVVFDEEAKWDWA 740

Query: 197  TNTNAASPSTNQWEIDFSSDQPQTPKTPSTPVSTHTTDITDLEFSTTSDSSEQPKRYRTL 18
              T       +  +I FS              S    D  + + + T      P+RYRTL
Sbjct: 741  A-TGTGDDEADPADI-FSISYTFHSVLDDEQCSGARPDADEPQDAVT----PAPRRYRTL 794

Query: 17   ADI 9
            A+I
Sbjct: 795  ANI 797


Top