BLASTX nr result

ID: Angelica22_contig00033224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033224
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591487.1| F-box/kelch-repeat protein [Medicago truncat...    71   8e-11
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    70   2e-10
gb|ABO92988.1| F-box domain-containing protein [Solanum tuberosum]     69   4e-10
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_003591487.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355480535|gb|AES61738.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 412

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 53/137 (38%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
 Frame = -3

Query: 376 DDVITKILLCLPVVSLLRCKSVSKSWLSHISSPNFVKSHLEITKTRGPDQIHIVHSYDYD 197
           DD++T+IL  LPV SLLR K VS  W + IS PNFVK H +  K+R P    ++  Y  +
Sbjct: 12  DDLLTEILSLLPVKSLLRFKCVSNPWKTLISDPNFVKFHFKKLKSRNPQHFTLITEYPDN 71

Query: 196 DEHDTSISLVN-LDNRQ--IVADLNFPFSQSEFPCMPQFLLTGSACGIVCV----RATFS 38
           D       +   LDN    +VAD +F  SQ +        L GS  G+VC+     A  S
Sbjct: 72  DYSIIPYPIPRILDNPSFTLVADPHFLLSQKDCS-----RLVGSCNGLVCLVGDRYAYGS 126

Query: 37  NVSRIY-----LWNPAT 2
            ++  Y     LWNPAT
Sbjct: 127 GLASCYEYWFRLWNPAT 143


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/126 (37%), Positives = 65/126 (51%)
 Frame = -3

Query: 379 PDDVITKILLCLPVVSLLRCKSVSKSWLSHISSPNFVKSHLEITKTRGPDQIHIVHSYDY 200
           P DVI +I+  LPV  +LR + V KSW S IS P FVK  L ++ TR    +H + +Y Y
Sbjct: 30  PSDVILEIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQLCVSTTR---NLHFL-NYAY 85

Query: 199 DDEHDTSISLVNLDNRQIVADLNFPFSQSEFPCMPQFLLTGSACGIVCVRATFSNVSRIY 20
           D        L +        D+N  F+QS++P    +   GS  GIVC+ A     S + 
Sbjct: 86  DSR---KYILTSYPLDSDFTDINSNFTQSDWPYAKFYRFIGSCNGIVCI-ADNEYTSLVI 141

Query: 19  LWNPAT 2
            WNP+T
Sbjct: 142 CWNPST 147


>gb|ABO92988.1| F-box domain-containing protein [Solanum tuberosum]
          Length = 424

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 47/124 (37%), Positives = 65/124 (52%)
 Frame = -3

Query: 379 PDDVITKILLCLPVVSLLRCKSVSKSWLSHISSPNFVKSHLEITKTRGPDQIHIVHSYDY 200
           P+++IT ILL LP  SLL+C  VSKSW   ISSP+FV +HL++ K       H    +  
Sbjct: 45  PNEIITAILLRLPTKSLLKCMCVSKSWHQLISSPDFVNTHLKLNK-------HHRVLFSG 97

Query: 199 DDEHDTSISLVNLDNRQIVADLNFPFSQSEFPCMPQFLLTGSACGIVCVRATFSNVSRIY 20
             E+    SL  L N+Q    L       + PC P F + GS  G++C+   F+     Y
Sbjct: 98  IFENIKFCSLPPLFNKQ---QLTQELFHMDPPCSPPFFV-GSVNGLICL---FNRRRDTY 150

Query: 19  LWNP 8
           +WNP
Sbjct: 151 IWNP 154


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
 Frame = -3

Query: 376 DDVITKILLCLPVVSLLRCKSVSKSWLSHISSPNFVKSHLEIT-KTRGPDQIHIVHSYDY 200
           +D+I +IL  LP+ SLLRC S+ KSW S I SP F+  HL+ T  +     + ++     
Sbjct: 7   EDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHLQHTISSTDRQNLFLLRLCSR 66

Query: 199 DDEHDTSISLVNLDNRQIVADLNFPFSQSEFPCMPQFLLTGSACGIVCVRATF-SNVSRI 23
           + E   S+ L N D  + +  L+FPF  SE      F + GS+ G++C+   F S +   
Sbjct: 67  EREEQYSLRLDNQDFNEHM-QLHFPFKSSE----SYFHVIGSSNGLICLANIFQSLIVSF 121

Query: 22  YLWNP 8
            LWNP
Sbjct: 122 ILWNP 126


>ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|222853856|gb|EEE91403.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/132 (34%), Positives = 69/132 (52%)
 Frame = -3

Query: 397 QVNLNPPDDVITKILLCLPVVSLLRCKSVSKSWLSHISSPNFVKSHLEITKTRGPDQIHI 218
           +++ N P D+I+ IL  LPV SL R KSVSKS L+ + +P FVK HL+    + P+ +  
Sbjct: 16  EMSANIPSDIISDILTRLPVKSLTRFKSVSKSMLAFLGNPEFVKQHLKRANLKNPNLVL- 74

Query: 217 VHSYDYDDEHDTSISLVNLDNRQIVADLNFPFSQSEFPCMPQFLLTGSACGIVCVRATFS 38
                   +HD+ +  V  +       L  PFS     C+ +  ++GS  GI+C+     
Sbjct: 75  --------KHDSKLFYVEDEEWSKARRLPLPFSL----CLEKVEISGSCNGILCISDQQC 122

Query: 37  NVSRIYLWNPAT 2
           N   I+L NP+T
Sbjct: 123 N-QDIFLLNPST 133


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