BLASTX nr result

ID: Angelica22_contig00033151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033151
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein ...    82   6e-14
emb|CAA16611.1| putative protein [Arabidopsis thaliana] gi|72687...    77   1e-12
ref|NP_567594.1| RNA recognition motif-containing protein [Arabi...    77   1e-12
ref|XP_002303346.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
gb|AAM63455.1| unknown [Arabidopsis thaliana]                          76   4e-12

>ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich
           RNA-binding protein 2-like [Vitis vinifera]
           gi|297738010|emb|CBI27211.3| unnamed protein product
           [Vitis vinifera] gi|297738011|emb|CBI27212.3| unnamed
           protein product [Vitis vinifera]
          Length = 140

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 39/68 (57%), Positives = 52/68 (76%)
 Frame = +2

Query: 2   VMIVKDEVKKRSKGYAFIQYSSQEAALQALENMDQKYVDGRLIYVELAKLDKRSYYRPPI 181
           V +VKD+  KR +GYAFIQY+SQ+ A+ ALENMD KY+DGR++ VELAK  K  + R P 
Sbjct: 67  VDVVKDKAAKRPRGYAFIQYTSQDHAMLALENMDHKYLDGRVVCVELAKPGKNDFGRYPR 126

Query: 182 TSGPPTEQ 205
           T GPP+++
Sbjct: 127 TCGPPSKK 134


>emb|CAA16611.1| putative protein [Arabidopsis thaliana] gi|7268798|emb|CAB79003.1|
           putative protein [Arabidopsis thaliana]
          Length = 115

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/65 (53%), Positives = 49/65 (75%)
 Frame = +2

Query: 2   VMIVKDEVKKRSKGYAFIQYSSQEAALQALENMDQKYVDGRLIYVELAKLDKRSYYRPPI 181
           V ++KDE  KRSKGYAFIQ++SQ+ A  A+E MD++  +GR+IY+++AK  KR +   P 
Sbjct: 32  VKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAKPGKRDFQGLPR 91

Query: 182 TSGPP 196
           TSGPP
Sbjct: 92  TSGPP 96


>ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|51971865|dbj|BAD44597.1| putative protein
           [Arabidopsis thaliana] gi|107738041|gb|ABF83619.1|
           At4g20030 [Arabidopsis thaliana]
           gi|332658864|gb|AEE84264.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 152

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/65 (53%), Positives = 49/65 (75%)
 Frame = +2

Query: 2   VMIVKDEVKKRSKGYAFIQYSSQEAALQALENMDQKYVDGRLIYVELAKLDKRSYYRPPI 181
           V ++KDE  KRSKGYAFIQ++SQ+ A  A+E MD++  +GR+IY+++AK  KR +   P 
Sbjct: 69  VKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAKPGKRDFQGLPR 128

Query: 182 TSGPP 196
           TSGPP
Sbjct: 129 TSGPP 133


>ref|XP_002303346.1| predicted protein [Populus trichocarpa] gi|222840778|gb|EEE78325.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/68 (58%), Positives = 50/68 (73%)
 Frame = +2

Query: 2   VMIVKDEVKKRSKGYAFIQYSSQEAALQALENMDQKYVDGRLIYVELAKLDKRSYYRPPI 181
           V +VKDE  KRSK YAFIQY+SQ+ A+ ALENMD+K +DGRLI+V+LAK  K  +     
Sbjct: 83  VKLVKDETIKRSKPYAFIQYTSQDDAILALENMDRKTLDGRLIFVDLAKPGKDRFRGYMK 142

Query: 182 TSGPPTEQ 205
           T GPP +Q
Sbjct: 143 TCGPPKKQ 150


>gb|AAM63455.1| unknown [Arabidopsis thaliana]
          Length = 152

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 34/65 (52%), Positives = 49/65 (75%)
 Frame = +2

Query: 2   VMIVKDEVKKRSKGYAFIQYSSQEAALQALENMDQKYVDGRLIYVELAKLDKRSYYRPPI 181
           V ++KDE  +RSKGYAFIQ++SQ+ A  A+E MD++  +GR+IY+++AK  KR +   P 
Sbjct: 69  VKLIKDEAMQRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAKPGKRDFQGLPR 128

Query: 182 TSGPP 196
           TSGPP
Sbjct: 129 TSGPP 133


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