BLASTX nr result

ID: Angelica22_contig00033080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033080
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19

>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 56/118 (47%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
 Frame = +3

Query: 66  MLYHGPRCLRLAAKTKPNLLRTIHF--FHSHKEPHYIPSNILPTCSSTQSLAQTKQAHAV 239
           M++H     +L + T P L +  HF  F S       P N+L  C+   +L+QTKQ HA 
Sbjct: 1   MIFHSHVVNKLPSITTP-LTKNTHFSSFFSTSLQTSNPPNLLQLCTLCDTLSQTKQVHAY 59

Query: 240 ALLHGLLPHSVSISASLILRYAHFKSPQAFTILFDQAVAHCRNAFLWNTLIRAFNIVG 413
           +LLHG LP SVS+ ASLIL+YA F  P    +LF  +VA+ R+AFLWNTLIRA +I G
Sbjct: 60  SLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAG 117


>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/81 (59%), Positives = 58/81 (71%)
 Frame = +3

Query: 165 YIPSNILPTCSSTQSLAQTKQAHAVALLHGLLPHSVSISASLILRYAHFKSPQAFTILFD 344
           YI  N+L  CS  QSL QTKQ HA+ +L+G LP SVS+ ASLIL YA F+ P +F  LF+
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 345 QAVAHCRNAFLWNTLIRAFNI 407
           Q   +CR AFLWNTLIRA +I
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSI 135


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