BLASTX nr result

ID: Angelica22_contig00033039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033039
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containi...   154   7e-36
ref|XP_004147131.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_002886049.1| pentatricopeptide repeat-containing protein ...   108   6e-22
ref|NP_179518.1| pentatricopeptide repeat-containing protein [Ar...   108   6e-22
gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|...   106   2e-21

>ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  154 bits (389), Expect = 7e-36
 Identities = 72/149 (48%), Positives = 107/149 (71%)
 Frame = +3

Query: 6   DRLKRIKSILANCGWNFCFSKYGYRDIVIDQHNIIRILNSLYEESRDASLAFFFYQWSQF 185
           D ++ IK IL N GWN   S+ GYR I + Q N+++ILN L+EES DA+LA +F++WS++
Sbjct: 32  DEMEIIKVILTNRGWNLG-SQNGYR-IDLSQFNVMKILNDLFEESTDAALALYFFRWSEY 89

Query: 186 CGDSKHSLPTICRMVHILISGNMNHRSIDVLCYLAQENDGEDQWHFLMKVLYETHIDTKG 365
           C  SKH++ ++C M+HIL+SGNMNH+++D+L +L   N GE+ WH +   ++ETH   + 
Sbjct: 90  CMGSKHTVESVCTMIHILVSGNMNHKAMDLLLHLISYNSGEEGWHNIFLKIHETHTKRRV 149

Query: 366 LGTAYSMLVDCYVKGNMPHIALELSRQMK 452
           L T Y MLV+CYVK NM  +AL+L  +M+
Sbjct: 150 LETVYGMLVNCYVKENMTQVALKLICKMR 178


>ref|XP_004147131.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g19280-like [Cucumis sativus]
           gi|449503522|ref|XP_004162044.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g19280-like [Cucumis sativus]
          Length = 532

 Score =  108 bits (269), Expect = 6e-22
 Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
 Frame = +3

Query: 6   DRLKRIKSILANCGWNFCFSKYGYRDIVIDQHNIIRILNSLYEESRDASLAFFFYQWSQF 185
           D ++ IK IL N G+N              Q  IIRIL+ L+E+S DA L  ++++WS  
Sbjct: 70  DEMETIKLILGNRGFNLGSCP--------KQLEIIRILDVLFEDSSDAGLCLYYFKWSGC 121

Query: 186 CGDSKHSLPTICRMVHILISGNMNHRSIDVLCYLAQENDG--EDQWHFLMKVLYETHIDT 359
              S  SL +ICRM HIL++GNMNHR++D++ +L  +N G  E     L+KV  ETH   
Sbjct: 122 LSGSNQSLESICRMAHILVAGNMNHRAVDLISHLV-KNYGCTEGSSSILLKVFCETHNGR 180

Query: 360 KGLGTAYSMLVDCYVKGNMPHIALELSRQMK 452
           K L T  SM+V+CY+K  M   AL L  QMK
Sbjct: 181 KTLETTCSMMVNCYIKERMVTSALILIDQMK 211


>ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331889|gb|EFH62308.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 755

 Score =  108 bits (269), Expect = 6e-22
 Identities = 58/148 (39%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
 Frame = +3

Query: 6   DRLKRIKSILANCGWNFCFSKY--GYRDIVIDQHNIIRILNSLYEESRDASLAFFFYQWS 179
           D ++ I+++L    W     KY  G+    +DQ+N+IRIL+ L+EE+ DAS+A +F++WS
Sbjct: 148 DCVETIRNVLTKHSW---IQKYESGF-STELDQYNVIRILDDLFEETLDASIALYFFRWS 203

Query: 180 QFCGDSKHSLPTICRMVHILISGNMNHRSIDVLCYLAQENDGEDQ-WHFLMKVLYETHID 356
           +      HS  +I RM+HIL+SGNMN+R++D+L  L ++  G+++    ++K L+ET ID
Sbjct: 204 ELWIGVAHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGKERSLCLVIKDLFETRID 263

Query: 357 TKGLGTAYSMLVDCYVKGNMPHIALELS 440
            + L T + ML+DC +K     +AL+L+
Sbjct: 264 RRVLETVFCMLIDCCIKERKVDMALKLT 291


>ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334184304|ref|NP_001189552.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g19280 gi|3135258|gb|AAC16458.1| putative
           salt-inducible protein [Arabidopsis thaliana]
           gi|330251769|gb|AEC06863.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330251770|gb|AEC06864.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/148 (38%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
 Frame = +3

Query: 6   DRLKRIKSILANCGWNFCFSKY--GYRDIVIDQHNIIRILNSLYEESRDASLAFFFYQWS 179
           D ++ I+++L    W     KY  G+    +DQ+ +IRIL+ L+EE+ DAS+  +F++WS
Sbjct: 81  DCVETIRNVLVKHNW---IQKYESGF-STELDQYTVIRILDDLFEETLDASIVLYFFRWS 136

Query: 180 QFCGDSKHSLPTICRMVHILISGNMNHRSIDVLCYLAQENDGEDQ-WHFLMKVLYETHID 356
           +     +HS  +I RM+HIL+SGNMN+R++D+L  L ++  GE++    +MK L+ET ID
Sbjct: 137 ELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRID 196

Query: 357 TKGLGTAYSMLVDCYVKGNMPHIALELS 440
            + L T +S+L+DC ++    ++AL+L+
Sbjct: 197 RRVLETVFSILIDCCIRERKVNMALKLT 224


>gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|BAD94048.1|
           putative salt-inducible protein [Arabidopsis thaliana]
           gi|110738808|dbj|BAF01327.1| putative salt-inducible
           protein [Arabidopsis thaliana]
          Length = 693

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/148 (37%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
 Frame = +3

Query: 6   DRLKRIKSILANCGWNFCFSKY--GYRDIVIDQHNIIRILNSLYEESRDASLAFFFYQWS 179
           D ++ I+++L    W     KY  G+    +DQ+ +IRIL+ L+EE+ DAS+  +F++WS
Sbjct: 81  DCVETIRNVLVKHNW---IQKYESGF-STELDQYTVIRILDDLFEETLDASIVLYFFRWS 136

Query: 180 QFCGDSKHSLPTICRMVHILISGNMNHRSIDVLCYLAQENDGEDQ-WHFLMKVLYETHID 356
           +     +HS  +I RM+HIL+SGNMN+R++D+L  L ++  GE++    +MK L++T ID
Sbjct: 137 ELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFKTRID 196

Query: 357 TKGLGTAYSMLVDCYVKGNMPHIALELS 440
            + L T +S+L+DC ++    ++AL+L+
Sbjct: 197 RRVLETVFSILIDCCIRERKVNMALKLT 224


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