BLASTX nr result

ID: Angelica22_contig00033037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033037
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subc...    88   8e-16
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...    87   1e-15
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...    87   2e-15
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...    86   3e-15
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...    86   3e-15

>gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1297

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/109 (45%), Positives = 61/109 (55%)
 Frame = -3

Query: 329 CPVKKAKKSVVGAQANTVLGTTGGPVVNMVVGEAVASETDNGYVTYNPVLLSTYLSHEWL 150
           CP +K +KS     AN V+   GG                +GY    P +LS Y S +W 
Sbjct: 329 CPERKDRKS-----ANMVISEGGGT---------------SGYGKMLPTVLSVYHSPDWW 368

Query: 149 IDTGANVHICADISLFVSYQQTHGMTVTMGNASAAQVLGIGNVDLKFAS 3
           +DTGAN+HICADISLF SYQ   G ++ MGN S A V G+G VDLKF S
Sbjct: 369 VDTGANIHICADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTS 417


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/109 (44%), Positives = 61/109 (55%)
 Frame = -3

Query: 329 CPVKKAKKSVVGAQANTVLGTTGGPVVNMVVGEAVASETDNGYVTYNPVLLSTYLSHEWL 150
           CP +K KKS     AN V+   GG +               GY  + P +LS   S +W 
Sbjct: 228 CPERKDKKS-----ANMVISEDGGTL---------------GYGKFLPTVLSVCHSPDWW 267

Query: 149 IDTGANVHICADISLFVSYQQTHGMTVTMGNASAAQVLGIGNVDLKFAS 3
           +DTGAN+H+CADISLF SYQ   G ++ MGN S A V G+G VDLKF S
Sbjct: 268 VDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTS 316


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/109 (44%), Positives = 61/109 (55%)
 Frame = -3

Query: 329 CPVKKAKKSVVGAQANTVLGTTGGPVVNMVVGEAVASETDNGYVTYNPVLLSTYLSHEWL 150
           CP +K KKS     AN ++   GG                +GY    P +LS + S +W 
Sbjct: 372 CPERKDKKS-----ANMIISEGGGT---------------SGYGKILPTVLSVFHSPDWW 411

Query: 149 IDTGANVHICADISLFVSYQQTHGMTVTMGNASAAQVLGIGNVDLKFAS 3
           +DTGAN+H+CADISLF SYQ   G ++ MGN S A V G+G VDLKF S
Sbjct: 412 VDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTS 460


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1448

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/109 (44%), Positives = 61/109 (55%)
 Frame = -3

Query: 329 CPVKKAKKSVVGAQANTVLGTTGGPVVNMVVGEAVASETDNGYVTYNPVLLSTYLSHEWL 150
           CP +K +KS     AN V+   GG                +GY    P +LS + S +W 
Sbjct: 407 CPERKDRKS-----ANMVISEGGGT---------------SGYGKILPTVLSVFHSPDWW 446

Query: 149 IDTGANVHICADISLFVSYQQTHGMTVTMGNASAAQVLGIGNVDLKFAS 3
           +DTGAN+H+CADISLF SYQ   G ++ MGN S A V G+G VDLKF S
Sbjct: 447 VDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTS 495


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1453

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/109 (43%), Positives = 61/109 (55%)
 Frame = -3

Query: 329 CPVKKAKKSVVGAQANTVLGTTGGPVVNMVVGEAVASETDNGYVTYNPVLLSTYLSHEWL 150
           CP +K +KS     AN ++   GG                +GY    P +LS + S +W 
Sbjct: 412 CPERKDRKS-----ANMIISEGGGT---------------SGYGKILPTVLSVFHSPDWW 451

Query: 149 IDTGANVHICADISLFVSYQQTHGMTVTMGNASAAQVLGIGNVDLKFAS 3
           +DTGAN+H+CADISLF SYQ   G ++ MGN S A V G+G VDLKF S
Sbjct: 452 VDTGANIHVCADISLFSSYQVERGSSLLMGNGSLAAVHGVGTVDLKFTS 500


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