BLASTX nr result

ID: Angelica22_contig00033016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00033016
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885945.1| SWIB complex BAF60b domain-containing protei...    70   2e-10
gb|AAL91165.1| unknown protein [Arabidopsis thaliana] gi|2489967...    70   3e-10
gb|AAM65680.1| unknown [Arabidopsis thaliana]                          70   3e-10
ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsi...    70   3e-10
ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arab...    67   2e-09

>ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331785|gb|EFH62204.1| SWIB complex
           BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 141

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 45/86 (52%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
 Frame = -2

Query: 248 TSSKLNKEMHNSVPKLTSQ-ASHANLDGVVAGAMPGPE---TKKRVLRGIMKPRPVSSEM 81
           T+S  N+    S  +L S  A+   L   V  A    E   T KRV RGIMKPRPVS EM
Sbjct: 16  TTSFHNQSTPPSSLRLASHPAAKLRLVRAVTSATASSEPTATNKRVPRGIMKPRPVSPEM 75

Query: 80  QAIVRVPEIARTQAIKVIWTYIKENN 3
           Q IV +PEIARTQA+K IW YIKE++
Sbjct: 76  QDIVELPEIARTQALKRIWAYIKEHD 101


>gb|AAL91165.1| unknown protein [Arabidopsis thaliana] gi|24899679|gb|AAN65054.1|
           unknown protein [Arabidopsis thaliana]
          Length = 141

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = -2

Query: 137 TKKRVLRGIMKPRPVSSEMQAIVRVPEIARTQAIKVIWTYIKENN 3
           T KRV RGIMKPRPVS EMQ IV +PEIARTQA+K IW YIKE++
Sbjct: 57  TNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHD 101


>gb|AAM65680.1| unknown [Arabidopsis thaliana]
          Length = 141

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = -2

Query: 137 TKKRVLRGIMKPRPVSSEMQAIVRVPEIARTQAIKVIWTYIKENN 3
           T KRV RGIMKPRPVS EMQ IV +PEIARTQA+K IW YIKE++
Sbjct: 57  TNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHD 101


>ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|13926219|gb|AAK49586.1|AF370580_1 Unknown protein
           [Arabidopsis thaliana] gi|3650030|gb|AAC61285.1|
           expressed protein [Arabidopsis thaliana]
           gi|330251251|gb|AEC06345.1| SWIB/MDM2 domain-containing
           protein [Arabidopsis thaliana]
          Length = 141

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = -2

Query: 137 TKKRVLRGIMKPRPVSSEMQAIVRVPEIARTQAIKVIWTYIKENN 3
           T KRV RGIMKPRPVS EMQ IV +PEIARTQA+K IW YIKE++
Sbjct: 57  TNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHD 101


>ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
           lyrata] gi|297314994|gb|EFH45417.1| hypothetical protein
           ARALYDRAFT_491238 [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/53 (64%), Positives = 39/53 (73%)
 Frame = -2

Query: 161 AGAMPGPETKKRVLRGIMKPRPVSSEMQAIVRVPEIARTQAIKVIWTYIKENN 3
           A + P   TK R  RGIMKPRPVS EMQ +V VPEI RTQA+K IW YIKE++
Sbjct: 52  ASSDPTTTTKTREPRGIMKPRPVSPEMQDVVGVPEIPRTQALKRIWAYIKEHD 104


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