BLASTX nr result

ID: Angelica22_contig00032992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032992
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553003.1| PREDICTED: probable pre-mRNA-splicing factor...   139   2e-31
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]   137   7e-31
ref|NP_189288.1| ATP-dependent RNA helicase DHX8/PRP22 [Arabidop...   137   7e-31
gb|AFW70820.1| putative RNA helicase family protein [Zea mays]        137   7e-31

>ref|XP_003553003.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 945

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = +3

Query: 3   LAEAGYTTNGKIGCTQPRRVAATSVAKRVAEEFGCCPGEEVGYAIRFENCTGPDTVIKYM 182
           LAEAGYTT GKIGCTQPRRVAATSVAKRVAEEFGC  GEEVGY+I+FENCTGPDTVIKYM
Sbjct: 329 LAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYSIQFENCTGPDTVIKYM 388

Query: 183 TDGMLMKEILSDENL 227
           TDGML++EIL DENL
Sbjct: 389 TDGMLLREILVDENL 403


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/75 (90%), Positives = 70/75 (93%)
 Frame = +3

Query: 3   LAEAGYTTNGKIGCTQPRRVAATSVAKRVAEEFGCCPGEEVGYAIRFENCTGPDTVIKYM 182
           LAEAGYTT GKIGCTQPRRVAA SVAKRVAEEFGC  GEEVGYAIRFE+CTGPDTVIKYM
Sbjct: 591 LAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYM 650

Query: 183 TDGMLMKEILSDENL 227
           TDGMLM+EIL DENL
Sbjct: 651 TDGMLMREILIDENL 665


>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
          Length = 1240

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/75 (89%), Positives = 70/75 (93%)
 Frame = +3

Query: 3   LAEAGYTTNGKIGCTQPRRVAATSVAKRVAEEFGCCPGEEVGYAIRFENCTGPDTVIKYM 182
           LAEAGYTT GKIGCTQPRRVAA SVAKRVAEEFGC  GEEVGYAIRFE+CTGPDTVIKYM
Sbjct: 624 LAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYM 683

Query: 183 TDGMLMKEILSDENL 227
           TDGML++EIL DENL
Sbjct: 684 TDGMLLREILVDENL 698


>ref|NP_189288.1| ATP-dependent RNA helicase DHX8/PRP22 [Arabidopsis thaliana]
           gi|27735187|sp|Q38953.2|DHX8_ARATH RecName:
           Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase gi|9293935|dbj|BAB01838.1| pre-mRNA splicing
           factor ATP-dependent RNA helicase-like protein
           [Arabidopsis thaliana] gi|332643657|gb|AEE77178.1|
           ATP-dependent RNA helicase DHX8/PRP22 [Arabidopsis
           thaliana]
          Length = 1168

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/75 (89%), Positives = 70/75 (93%)
 Frame = +3

Query: 3   LAEAGYTTNGKIGCTQPRRVAATSVAKRVAEEFGCCPGEEVGYAIRFENCTGPDTVIKYM 182
           LAEAGYTT GKIGCTQPRRVAA SVAKRVAEEFGC  GEEVGYAIRFE+CTGPDTVIKYM
Sbjct: 552 LAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYM 611

Query: 183 TDGMLMKEILSDENL 227
           TDGML++EIL DENL
Sbjct: 612 TDGMLLREILIDENL 626


>gb|AFW70820.1| putative RNA helicase family protein [Zea mays]
          Length = 1236

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/75 (89%), Positives = 70/75 (93%)
 Frame = +3

Query: 3   LAEAGYTTNGKIGCTQPRRVAATSVAKRVAEEFGCCPGEEVGYAIRFENCTGPDTVIKYM 182
           LAEAGYTT GKIGCTQPRRVAA SVAKRVAEEFGC  GEEVGYAIRFE+CTGPDTVIKYM
Sbjct: 620 LAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYM 679

Query: 183 TDGMLMKEILSDENL 227
           TDGML++EIL DENL
Sbjct: 680 TDGMLLREILVDENL 694


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