BLASTX nr result

ID: Angelica22_contig00032873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032873
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307067.1| predicted protein [Populus trichocarpa] gi|2...    88   4e-22
ref|XP_003552808.1| PREDICTED: putative uncharacterized protein ...    92   4e-22
ref|XP_003537562.1| PREDICTED: putative uncharacterized protein ...    89   2e-20
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h...    87   3e-20
emb|CBI33150.3| unnamed protein product [Vitis vinifera]               85   4e-20

>ref|XP_002307067.1| predicted protein [Populus trichocarpa] gi|222856516|gb|EEE94063.1|
            predicted protein [Populus trichocarpa]
          Length = 1743

 Score = 87.8 bits (216), Expect(3) = 4e-22
 Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 10/91 (10%)
 Frame = -2

Query: 248  FQPKRNSQVSSVHIQVCPPEPNDTYKKA---------LEVAKALEQIEGKVLPGCRSWQK 96
            F PKRN Q S   +QV PPE  D + KA         LE A+ALE +EGKVLPGC SWQK
Sbjct: 1244 FMPKRNPQTSCCRVQVFPPELKDAFMKAFITFDGRLHLEAARALEHMEGKVLPGCHSWQK 1303

Query: 95   IQFQQ-FHSFVSRPSSVYAVIKEQLKYLISN 6
            I+ +Q FHS +S  +S+Y  IK+QL  L+++
Sbjct: 1304 IKCEQMFHSLISCSASIYVAIKKQLDSLLAS 1334



 Score = 39.3 bits (90), Expect(3) = 4e-22
 Identities = 14/23 (60%), Positives = 20/23 (86%)
 Frame = -1

Query: 333  LDFFLIRGESIEDPPCATCEKAL 265
            LDFF++RG+++E+PP   CEKAL
Sbjct: 1215 LDFFIVRGDAVENPPLGACEKAL 1237



 Score = 22.3 bits (46), Expect(3) = 4e-22
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 274  KSPLREITPFSPK 236
            K+ LREI+PF PK
Sbjct: 1235 KALLREISPFMPK 1247


>ref|XP_003552808.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1729

 Score = 92.0 bits (227), Expect(2) = 4e-22
 Identities = 50/96 (52%), Positives = 63/96 (65%), Gaps = 10/96 (10%)
 Frame = -2

Query: 263  KRNHTFQPKRNSQVSSVHIQVCPPEPNDTYKKAL---------EVAKALEQIEGKVLPGC 111
            K  + F PKRN  +S   +QV  PEP D + +AL         E AKALEQIEGKVLPGC
Sbjct: 1226 KEIYPFLPKRNPHISPCRVQVFAPEPKDAFMRALITFDGRLHLEAAKALEQIEGKVLPGC 1285

Query: 110  RSWQKIQFQQ-FHSFVSRPSSVYAVIKEQLKYLISN 6
             SWQKI+ QQ FHS ++ P+ VY VIKEQL  ++++
Sbjct: 1286 LSWQKIKCQQLFHSSLTFPTPVYRVIKEQLDEVLAS 1321



 Score = 37.4 bits (85), Expect(2) = 4e-22
 Identities = 14/23 (60%), Positives = 20/23 (86%)
 Frame = -1

Query: 333  LDFFLIRGESIEDPPCATCEKAL 265
            LDFFL+RGE++ +PPC+  E+AL
Sbjct: 1202 LDFFLVRGEAVGNPPCSALEEAL 1224


>ref|XP_003537562.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1736

 Score = 89.4 bits (220), Expect(2) = 2e-20
 Identities = 49/96 (51%), Positives = 62/96 (64%), Gaps = 10/96 (10%)
 Frame = -2

Query: 263  KRNHTFQPKRNSQVSSVHIQVCPPEPNDTYKKAL---------EVAKALEQIEGKVLPGC 111
            K  + F PKRN  +    +QV  PEP D++ +AL         E AKALEQIEGKVLPGC
Sbjct: 1232 KEIYPFLPKRNPHIIPCRVQVFAPEPKDSFMRALITFDGRLHLEAAKALEQIEGKVLPGC 1291

Query: 110  RSWQKIQFQQ-FHSFVSRPSSVYAVIKEQLKYLISN 6
             SWQKI+ QQ FHS +  P+ VY VIKEQL  ++++
Sbjct: 1292 LSWQKIKCQQLFHSSIIFPTPVYHVIKEQLDEVLAS 1327



 Score = 34.7 bits (78), Expect(2) = 2e-20
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -1

Query: 333  LDFFLIRGESIEDPPCATCEKAL 265
            LDFFL+RG++  +PPC+  E+AL
Sbjct: 1208 LDFFLVRGDAAGNPPCSALEEAL 1230


>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
            [Medicago truncatula] gi|355490965|gb|AES72168.1|
            Pre-mRNA splicing factor ATP-dependent RNA helicase-like
            protein [Medicago truncatula]
          Length = 1718

 Score = 87.4 bits (215), Expect(2) = 3e-20
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 10/97 (10%)
 Frame = -2

Query: 266  FKRNHTFQPKRNSQVSSVHIQVCPPEPNDTYKKAL---------EVAKALEQIEGKVLPG 114
            FK      PK N  +SS  +QV PPEP D++ +AL         E AKALE+IEGKVLPG
Sbjct: 1214 FKEISPLIPKINPHISSCRVQVFPPEPKDSFMRALINFDGRLHLEAAKALEKIEGKVLPG 1273

Query: 113  CRSWQKIQFQQ-FHSFVSRPSSVYAVIKEQLKYLISN 6
            C SWQKI+ +Q FHS +  P+ VY VI EQL+ ++++
Sbjct: 1274 CLSWQKIKCEQLFHSSLIFPAPVYHVIAEQLEKILTS 1310



 Score = 35.8 bits (81), Expect(2) = 3e-20
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = -1

Query: 333  LDFFLIRGESIEDPPCATCEKAL 265
            LDFFL+RG+++ +P C+ CE++L
Sbjct: 1191 LDFFLVRGDAVGNPSCSACEESL 1213


>emb|CBI33150.3| unnamed protein product [Vitis vinifera]
          Length = 1988

 Score = 85.1 bits (209), Expect(2) = 4e-20
 Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 10/92 (10%)
 Frame = -2

Query: 248  FQPKRNSQVSSVHIQVCPPEPNDTYKKAL---------EVAKALEQIEGKVLPGCRSWQK 96
            F  K     +    QV PPEP D++ KAL         E AKALE+IEGKVL GC SWQK
Sbjct: 1244 FMSKTKPHGNCCQAQVFPPEPKDSFMKALITFDGRLHLEAAKALEEIEGKVLSGCLSWQK 1303

Query: 95   IQFQQ-FHSFVSRPSSVYAVIKEQLKYLISNL 3
            I+ QQ FHS+VS P+ VY+VIK+QL  L+++L
Sbjct: 1304 IKCQQLFHSYVSCPAPVYSVIKKQLVSLLASL 1335



 Score = 37.7 bits (86), Expect(2) = 4e-20
 Identities = 13/23 (56%), Positives = 20/23 (86%)
 Frame = -1

Query: 333  LDFFLIRGESIEDPPCATCEKAL 265
            LDFFL+RG+++++P C  CE+AL
Sbjct: 1215 LDFFLVRGDAVKNPSCGACEEAL 1237


Top