BLASTX nr result

ID: Angelica22_contig00032798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032798
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...    54   2e-12
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...    53   3e-12
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi...    53   3e-12
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo...    53   3e-12
ref|XP_002445371.1| hypothetical protein SORBIDRAFT_07g013770 [S...    59   4e-12

>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score = 54.3 bits (129), Expect(2) = 2e-12
 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
 Frame = -3

Query: 286 RVKPL*TTVDSLMVPGQNEWDVDLINDVFEERDANLILAISPSGSEPDSW-YWRKEKMGQ 110
           R + L T V  L+ P    WD +LI+DVF   DA  IL I P+  E   W  W  +  G 
Sbjct: 376 RGRYLITKVSDLINPSTGTWDENLISDVFWPEDAEAILMI-PTDYEAVDWPAWHYDSKGV 434

Query: 109 YSVKSAYTLIQTSKEIHHTSDNS----------GFR-RKLWNLKVP 5
           +SVKSAY L    ++    +D S          GFR  KLW L +P
Sbjct: 435 FSVKSAYKLAVQIRDHQKGTDASTSMAENQNTYGFRWGKLWQLNIP 480



 Score = 42.7 bits (99), Expect(2) = 2e-12
 Identities = 16/33 (48%), Positives = 26/33 (78%)
 Frame = -2

Query: 413 RSVLEAKFLIKQGVSRRVGNGTTVNITTDPWLP 315
           RS+++   L+K+G+  R+G+G+ VNI TDPW+P
Sbjct: 333 RSIIDGINLLKEGIIWRIGSGSNVNIWTDPWIP 365


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score = 52.8 bits (125), Expect(2) = 3e-12
 Identities = 29/77 (37%), Positives = 40/77 (51%)
 Frame = -3

Query: 313 RMMTHLCIRRVKPL*TTVDSLMVPGQNEWDVDLINDVFEERDANLILAISPSGSEPDSWY 134
           R M  +  RR   L T V  L+ P   +WD++LI  +F E DA +I  I     + D   
Sbjct: 463 RDMRFVTTRRGASLITRVCELIDPTTGQWDIELIQQIFNENDAKIITRIPLREGQEDFIA 522

Query: 133 WRKEKMGQYSVKSAYTL 83
           W+ +  G +SVKSAY L
Sbjct: 523 WQPDTKGIFSVKSAYKL 539



 Score = 43.5 bits (101), Expect(2) = 3e-12
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -2

Query: 413 RSVLEAKFLIKQGVSRRVGNGTTVNITTDPWLPSD 309
           RS+L+   L+++GV  RVGNG  +NI +DPWLP D
Sbjct: 430 RSILKGIQLLRKGVIWRVGNGEHINIWSDPWLPRD 464


>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
          Length = 697

 Score = 52.8 bits (125), Expect(2) = 3e-12
 Identities = 29/77 (37%), Positives = 40/77 (51%)
 Frame = -3

Query: 313 RMMTHLCIRRVKPL*TTVDSLMVPGQNEWDVDLINDVFEERDANLILAISPSGSEPDSWY 134
           R M  +  RR   L T V  L+ P   +WD++LI  +F E DA +I  I     + D   
Sbjct: 463 RDMRFVTTRRGASLITRVCELIDPTTGQWDIELIQQIFNENDAKIITRIPLREGQEDFIA 522

Query: 133 WRKEKMGQYSVKSAYTL 83
           W+ +  G +SVKSAY L
Sbjct: 523 WQPDTKGIFSVKSAYKL 539



 Score = 43.5 bits (101), Expect(2) = 3e-12
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -2

Query: 413 RSVLEAKFLIKQGVSRRVGNGTTVNITTDPWLPSD 309
           RS+L+   L+++GV  RVGNG  +NI +DPWLP D
Sbjct: 430 RSILKGIQLLRKGVIWRVGNGEHINIWSDPWLPRD 464


>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 566

 Score = 52.8 bits (125), Expect(2) = 3e-12
 Identities = 29/77 (37%), Positives = 40/77 (51%)
 Frame = -3

Query: 313 RMMTHLCIRRVKPL*TTVDSLMVPGQNEWDVDLINDVFEERDANLILAISPSGSEPDSWY 134
           R M  +  RR   L T V  L+ P   +WD++LI  +F E DA +I  I     + D   
Sbjct: 332 RDMRFVTTRRGASLITRVCELIDPTTGQWDIELIQQIFNENDAKIITRIPLREGQEDFIA 391

Query: 133 WRKEKMGQYSVKSAYTL 83
           W+ +  G +SVKSAY L
Sbjct: 392 WQPDTKGIFSVKSAYKL 408



 Score = 43.5 bits (101), Expect(2) = 3e-12
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -2

Query: 413 RSVLEAKFLIKQGVSRRVGNGTTVNITTDPWLPSD 309
           RS+L+   L+++GV  RVGNG  +NI +DPWLP D
Sbjct: 299 RSILKGIQLLRKGVIWRVGNGEHINIWSDPWLPRD 333


>ref|XP_002445371.1| hypothetical protein SORBIDRAFT_07g013770 [Sorghum bicolor]
           gi|241941721|gb|EES14866.1| hypothetical protein
           SORBIDRAFT_07g013770 [Sorghum bicolor]
          Length = 340

 Score = 59.3 bits (142), Expect(2) = 4e-12
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = -3

Query: 268 TTVDSLMVPGQNEWDVDLINDVFEERDANLILAISPSGSEPDSWYWRKEKMGQYSVKSAY 89
           T VD L+ P    WDV+L+ND F E DANLILA+  +    +   W+ ++ G +SVKSAY
Sbjct: 55  TYVDDLIDPATGSWDVELVNDTFWEEDANLILALPVNQGRENVLAWQYDERGLFSVKSAY 114



 Score = 36.6 bits (83), Expect(2) = 4e-12
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = -2

Query: 413 RSVLEAKFLIKQGVSRRVGNGTTVNITTDPWLPSDD 306
           RS+L    ++K G+  RVG+G  + I +DPW+P +D
Sbjct: 6   RSILRGLEVMKLGMIWRVGDGRNLKIWSDPWIPRED 41


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