BLASTX nr result

ID: Angelica22_contig00032737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032737
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
emb|CBI39619.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
 Frame = +3

Query: 102 YMSLPKRS----VATAIKSTINHRPTSKPTINLSILKTHLLKCQNHNQFNQILSQMLTTS 269
           ++SL K S    +++A+KST NH+PT KPTI LSIL+THL  C N  QFN+ILSQM+ T 
Sbjct: 9   HLSLMKLSKLNQLSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTG 68

Query: 270 YIKD 281
           +I D
Sbjct: 69  FISD 72


>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = +3

Query: 105 MSLPK-RSVATAIKSTINHRPTSKPTINLSILKTHLLKCQNHNQFNQILSQMLTTSYIKD 281
           M L K   +++A+KST NH+PT KPTI LSIL+THL  C N  QFN+ILSQM+ T +I D
Sbjct: 1   MKLSKLNQLSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISD 60


>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +3

Query: 165 TSKPTINLSILKTHLLKCQNHNQFNQILSQMLTTSYIKD 281
           T KPT+ L IL+THL KCQN  QFNQILSQM+ + + KD
Sbjct: 19  TLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKD 57


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