BLASTX nr result

ID: Angelica22_contig00032635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032635
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             120   9e-26
gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabid...   117   1e-24
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             115   3e-24
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   115   3e-24
emb|CAN84035.1| hypothetical protein VITISV_016995 [Vitis vinifera]   110   9e-23

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/95 (58%), Positives = 72/95 (75%)
 Frame = +3

Query: 12  EILILYLAVSEYSISAVLVREEVDHQSPVYYVSKRLLDAETRYTGMEKLVYALILAARKL 191
           E L LY++VS +++S VLVRE+   Q P+YYVSK + D ETRYT MEKL  A++ +ARKL
Sbjct: 316 EKLYLYVSVSNHAVSGVLVREDRGEQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKL 375

Query: 192 RPYFQAHKIEVRTQYPLRTILHKPEASGRMLKWAI 296
           RPYFQ+H ++V T  PLRTILH P  SGR+ KWA+
Sbjct: 376 RPYFQSHPVQVLTNQPLRTILHSPSQSGRLAKWAV 410


>gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1212

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/96 (61%), Positives = 69/96 (71%)
 Frame = +3

Query: 9   GEILILYLAVSEYSISAVLVREEVDHQSPVYYVSKRLLDAETRYTGMEKLVYALILAARK 188
           GE L LY++VSE +IS VLVR E   + P++YVSK   D ETRY  MEKL  A++ AARK
Sbjct: 615 GERLFLYISVSENAISGVLVRVERSDERPIFYVSKSFSDVETRYPMMEKLALAVVTAARK 674

Query: 189 LRPYFQAHKIEVRTQYPLRTILHKPEASGRMLKWAI 296
           LRPYFQ+H I V T  PLRTILH P  SGR+ KWAI
Sbjct: 675 LRPYFQSHPIVVLTSLPLRTILHSPNQSGRLAKWAI 710


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/96 (56%), Positives = 71/96 (73%)
 Frame = +3

Query: 9    GEILILYLAVSEYSISAVLVREEVDHQSPVYYVSKRLLDAETRYTGMEKLVYALILAARK 188
            GE L LY+AVS++++S+VLVRE+   Q P++Y SK L++AETRY  +EK   A++ +ARK
Sbjct: 1118 GETLYLYIAVSDHAVSSVLVREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARK 1177

Query: 189  LRPYFQAHKIEVRTQYPLRTILHKPEASGRMLKWAI 296
            LRPYFQ+H I V T  PLR  LH P  SGRM KWA+
Sbjct: 1178 LRPYFQSHTIAVLTDQPLRVALHSPSQSGRMTKWAV 1213


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/97 (55%), Positives = 73/97 (75%)
 Frame = +3

Query: 6    DGEILILYLAVSEYSISAVLVREEVDHQSPVYYVSKRLLDAETRYTGMEKLVYALILAAR 185
            +GE L LY+AVS  ++S VLVRE+   Q P++YVSK L  AE RY  +EKL +A++++AR
Sbjct: 1055 EGETLYLYIAVSTSAVSGVLVREDRGEQHPIFYVSKTLDGAELRYPTLEKLAFAVVISAR 1114

Query: 186  KLRPYFQAHKIEVRTQYPLRTILHKPEASGRMLKWAI 296
            KLRPYF+++ +EV T  PLRTILH P  SGR+ KWA+
Sbjct: 1115 KLRPYFKSYTVEVLTNQPLRTILHSPSQSGRLAKWAV 1151


>emb|CAN84035.1| hypothetical protein VITISV_016995 [Vitis vinifera]
          Length = 965

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/96 (61%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = +3

Query: 12  EILILYLAVSEYSISAVLVR-EEVDHQSPVYYVSKRLLDAETRYTGMEKLVYALILAARK 188
           E L +YLAVSE++ISAVL R      Q PVYYVS+ L D ETRY+ ME    AL  AA+K
Sbjct: 316 EKLYMYLAVSEWAISAVLFRYPSPKEQKPVYYVSRALADVETRYSKMELTALALRSAAQK 375

Query: 189 LRPYFQAHKIEVRTQYPLRTILHKPEASGRMLKWAI 296
           LRPYFQAH + V T  PLR+ILHKP+ +GRML+WAI
Sbjct: 376 LRPYFQAHPVIVLTDQPLRSILHKPDLTGRMLQWAI 411


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