BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032579
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc...    78   5e-17
gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sa...    75   3e-16
gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subc...    79   4e-16
gb|AAV24758.1| putative polyprotein [Oryza sativa Japonica Group]      70   9e-15
emb|CAN67912.1| hypothetical protein VITISV_004101 [Vitis vinifera]    64   7e-13

>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1407

 Score = 78.2 bits (191), Expect(2) = 5e-17
 Identities = 40/71 (56%), Positives = 50/71 (70%)
 Frame = -2

Query: 213 KGFHLRRTLQKGERTIRNRNGESVQVEAVRTLPLLLESGFTLYLNDVLYVPIMTRNLDPV 34
           +GF +RRTL++GER IR  NG   +VEA+    L L +GF L L+DVLYVP M RNL  V
Sbjct: 336 QGFAMRRTLKRGERRIRVANGVETEVEAIGDFTLTLHTGFKLQLHDVLYVPSMKRNLVSV 395

Query: 33  SRLDDDGFSFT 1
           SRLD+DG+  T
Sbjct: 396 SRLDNDGYYCT 406



 Score = 34.3 bits (77), Expect(2) = 5e-17
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 283 CHFCKIHEHIQKECAKFREWLEKKG 209
           C+FC    H QK+C  F  WL KKG
Sbjct: 277 CYFCGKSGHRQKDCIGFMRWLSKKG 301


>gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|21321753|gb|AAM47288.1|AC122146_7 Putative gag-pol
           polyprotein [Oryza sativa Japonica Group]
           gi|31430568|gb|AAP52462.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1225

 Score = 75.5 bits (184), Expect(2) = 3e-16
 Identities = 39/71 (54%), Positives = 49/71 (69%)
 Frame = -2

Query: 213 KGFHLRRTLQKGERTIRNRNGESVQVEAVRTLPLLLESGFTLYLNDVLYVPIMTRNLDPV 34
           +GF +RRTL++GER IR  NG   +VEA+    L L +GF L L+DVLYVP M RNL  V
Sbjct: 336 QGFAMRRTLRRGERRIRVANGVETEVEAIGDFTLTLHTGFKLQLHDVLYVPSMKRNLVSV 395

Query: 33  SRLDDDGFSFT 1
           SRLD+ G+  T
Sbjct: 396 SRLDNGGYYCT 406



 Score = 34.3 bits (77), Expect(2) = 3e-16
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 283 CHFCKIHEHIQKECAKFREWLEKKG 209
           C+FC    H QK+C  F  WL KKG
Sbjct: 277 CYFCGKSGHRQKDCIGFMRWLSKKG 301


>gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 815

 Score = 79.0 bits (193), Expect(2) = 4e-16
 Identities = 39/69 (56%), Positives = 50/69 (72%)
 Frame = -2

Query: 213 KGFHLRRTLQKGERTIRNRNGESVQVEAVRTLPLLLESGFTLYLNDVLYVPIMTRNLDPV 34
           +GFH RR L +GER IR  NG   +VEA+   PL L +GFTLYL++VLYVP ++RNL  V
Sbjct: 263 QGFHTRRMLARGERCIRVANGVEAEVEAIGEYPLKLNNGFTLYLHNVLYVPSLSRNLVSV 322

Query: 33  SRLDDDGFS 7
           S L DDG++
Sbjct: 323 SCLADDGYN 331



 Score = 30.4 bits (67), Expect(2) = 4e-16
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 283 CHFCKIHEHIQKECAKFREWLEKKG 209
           C +CK   H QK+C +F + L KKG
Sbjct: 229 CRWCKQKGHFQKDCPEFLKHLLKKG 253


>gb|AAV24758.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1206

 Score = 70.5 bits (171), Expect(2) = 9e-15
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = -2

Query: 213 KGFHLRRTLQKGERTIRNRNGESVQVEAVRTLPLLLESGFTLYLNDVLYVPIMTRNLDPV 34
           +GF +RRTL++GER I+  NG   +V+A+    L L +GF   L+DVLYVP M RNL  V
Sbjct: 300 QGFTMRRTLRRGERRIKVANGVETEVKAIGDFILTLHTGFKFQLHDVLYVPSMKRNLISV 359

Query: 33  SRLDDDGFSFT 1
           SRLD+ G+  T
Sbjct: 360 SRLDNGGYYCT 370



 Score = 34.3 bits (77), Expect(2) = 9e-15
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 283 CHFCKIHEHIQKECAKFREWLEKKG 209
           C+FC    H QK+C  F  WL KKG
Sbjct: 241 CYFCGKSGHRQKDCIGFMRWLSKKG 265


>emb|CAN67912.1| hypothetical protein VITISV_004101 [Vitis vinifera]
          Length = 1012

 Score = 64.3 bits (155), Expect(2) = 7e-13
 Identities = 32/68 (47%), Positives = 45/68 (66%)
 Frame = -2

Query: 213 KGFHLRRTLQKGERTIRNRNGESVQVEAVRTLPLLLESGFTLYLNDVLYVPIMTRNLDPV 34
           +G+   + L KGERTI   NG  V++EA+ +L L+L+ GF + L D +YVP+ TRNL  V
Sbjct: 274 QGYLTSKKLSKGERTITLGNGIEVEIEAIGSLHLILDIGFIMDLVDTIYVPVFTRNLISV 333

Query: 33  SRLDDDGF 10
            RLD  G+
Sbjct: 334 PRLDSYGY 341



 Score = 33.9 bits (76), Expect(2) = 7e-13
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 283 CHFCKIHEHIQKECAKFREWLEKK 212
           CHFC    H  ++C+ F+ WLEKK
Sbjct: 228 CHFCHKKGHKIRDCSGFKAWLEKK 251