BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032513
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031615.1| RNA-directed DNA polymerase (reverse transcr...    55   5e-06
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    55   6e-06
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    55   6e-06
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    55   8e-06

>ref|NP_001031615.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962109|gb|ABF59384.1| unknown protein [Arabidopsis
           thaliana] gi|332657509|gb|AEE82909.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 146

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = -2

Query: 345 SFGLDVLPYCLLCVGGIETASHLFVTCPYSSFVLSKLAGFLKVDCVGLSWVEFLSNW-GL 169
           S+GL + P C LC   +ET  HL +TC +SS + + +   L++  V     E L +W  L
Sbjct: 17  SWGLQISPLCCLCSQSVETRDHLILTCGFSSSIWNMVQARLRLQPVQFRVWESLLSWIKL 76

Query: 168 NTSCHLRHVLLLAAQIFSYHLWRERNARHHNKGSFGPSKLLQGI 37
           +T+     +  L AQ     +W++RN   HN     PS + + I
Sbjct: 77  STASSPSIIRKLVAQATVCAIWKQRNNLLHNLQDILPSIIFKNI 120


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
 Frame = -2

Query: 318  CLLCVGGIETASHLFVTCPYSSFVLSKLAGFLKVDCVGLSWVEFLSNWGLNTSCHLRHVL 139
            C+LC   +ET  HLF +C Y+S +   LA  L        W   +S   ++  CH R   
Sbjct: 803  CVLCNNNLETRDHLFFSCAYTSGIWEALAKNLLQRSYTTDWQTIISY--VSGQCHDRVSC 860

Query: 138  LLAAQIFS---YHLWRERNARHHNKGSFGPSKLLQGIVVDLKSKL 13
             LA  +     Y +WRERN R H +     ++L+Q I   +++ L
Sbjct: 861  FLARSVLQASVYTIWRERNGRRHGETPNPAARLIQWIDKHIRNML 905


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
 Frame = -2

Query: 318 CLLCVGGIETASHLFVTCPYSSFVLSKLAGFLKVDCVGLSWVEFLSNWGLNTSCHLRHVL 139
           C+LC   +E+  HLF +CP+++ +   LA  +   C    W   ++N   N    +   L
Sbjct: 347 CILCNKALESRDHLFFSCPFATEIWEPLAKTIYNTCFYTDWQTIINNVSRNWPDRIAGFL 406

Query: 138 L-LAAQIFSYHLWRERNARHHNKGSFGPSKLLQGIVVDLKSKLQS 7
                Q+  Y LWRERN R H       S+L+  I   +++ L +
Sbjct: 407 ARCILQVTIYTLWRERNERKHGASPNSSSRLISWIDKHIRNHLMA 451


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
 Frame = -2

Query: 318  CLLCVGGIETASHLFVTCPYSSFVLSKLAGFLKVDCVGLSWVEFLSNWGLNTSCHLRHVL 139
            C LC    ET  HLF +C Y+S+V   L   L        W    +   L TS   R  L
Sbjct: 1396 CTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRDWNRLFTL--LCTSNLPRDHL 1453

Query: 138  LLAAQIFS---YHLWRERNARHHNKGSFGPSKLLQGIVVDLKSKLQS 7
             L   +F    YH+WRERNAR H + S   ++L++ I   +++++ S
Sbjct: 1454 FLFRYVFQASIYHIWRERNARRHGEISSPTNRLIKLIDKTVRNRISS 1500