BLASTX nr result

ID: Angelica22_contig00032440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032440
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22025.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,...   119   3e-25
ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22

>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/72 (79%), Positives = 62/72 (86%)
 Frame = -2

Query: 216 FDEMPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDL 37
           FDEMP+RNVATWNAMVAGL QFEFNEEG+ LF RM E+GF PDEF LGSVLRGCAG++ L
Sbjct: 141 FDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRAL 200

Query: 36  SMGRQVHGYVVK 1
             GRQVHGYV K
Sbjct: 201 VAGRQVHGYVRK 212



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/69 (37%), Positives = 39/69 (56%)
 Frame = -2

Query: 207 MPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDLSMG 28
           MP +NV  WN ++AG  Q  + EE +  +  M   GF PD+ T  SV+  C+ +  L  G
Sbjct: 245 MPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQG 304

Query: 27  RQVHGYVVK 1
           +Q+H  V+K
Sbjct: 305 QQIHAEVIK 313


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/72 (79%), Positives = 62/72 (86%)
 Frame = -2

Query: 216 FDEMPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDL 37
           FDEMP+RNVATWNAMVAGL QFEFNEEG+ LF RM E+GF PDEF LGSVLRGCAG++ L
Sbjct: 141 FDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRAL 200

Query: 36  SMGRQVHGYVVK 1
             GRQVHGYV K
Sbjct: 201 VAGRQVHGYVRK 212



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/69 (37%), Positives = 39/69 (56%)
 Frame = -2

Query: 207 MPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDLSMG 28
           MP +NV  WN ++AG  Q  + EE +  +  M   GF PD+ T  SV+  C+ +  L  G
Sbjct: 245 MPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQG 304

Query: 27  RQVHGYVVK 1
           +Q+H  V+K
Sbjct: 305 QQIHAEVIK 313


>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 332

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/72 (76%), Positives = 63/72 (87%)
 Frame = -2

Query: 216 FDEMPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDL 37
           FDEMP+RNVATWNA+VAGL QFE NEEG++LF  MYE+GF PDE+TLGSVLRGCAG+K +
Sbjct: 46  FDEMPERNVATWNAVVAGLIQFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGCAGLKSM 105

Query: 36  SMGRQVHGYVVK 1
             GRQVH YVVK
Sbjct: 106 YAGRQVHCYVVK 117



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/69 (39%), Positives = 42/69 (60%)
 Frame = -2

Query: 207 MPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDLSMG 28
           MP RN+  WN ++AG +Q   +EE + L+  M  +GF PD+ T  SV+  C+ +  L  G
Sbjct: 150 MPSRNIVAWNTLIAGKSQNGHSEEVLDLYNMMRIMGFRPDKITFASVISSCSELTTLGQG 209

Query: 27  RQVHGYVVK 1
           +Q+H  V+K
Sbjct: 210 QQIHAEVIK 218


>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/72 (70%), Positives = 60/72 (83%)
 Frame = -2

Query: 216 FDEMPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDL 37
           FDEM +RNVATWNAMV+GL QFEFNE G+ LF  M+E+GF PDEFTLGSVLRGCAG++  
Sbjct: 46  FDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRAS 105

Query: 36  SMGRQVHGYVVK 1
             G+QVH YV+K
Sbjct: 106 YAGKQVHAYVLK 117


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/72 (66%), Positives = 61/72 (84%)
 Frame = -2

Query: 216 FDEMPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDL 37
           FDEM +RN+ATWNAM+AGLTQFEFN++ +SLF  MY +GF PDEFTLGSVLRGCAG++ L
Sbjct: 151 FDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSL 210

Query: 36  SMGRQVHGYVVK 1
             G++VH  ++K
Sbjct: 211 LAGQEVHACLLK 222



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = -2

Query: 207 MPKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKDLSMG 28
           MP R V  WN ++AG  Q    EE ++ +  M   GF PD+ T  SVL  C+ +  L  G
Sbjct: 255 MPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQG 314

Query: 27  RQVHGYVVK 1
           +Q+H  V+K
Sbjct: 315 QQIHAEVIK 323


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