BLASTX nr result

ID: Angelica22_contig00032272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032272
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002531295.1| pentatricopeptide repeat-containing protein,...   146   2e-33
ref|XP_004135653.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33

>ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
           [Vitis vinifera] gi|298204853|emb|CBI34160.3| unnamed
           protein product [Vitis vinifera]
          Length = 471

 Score =  156 bits (395), Expect = 1e-36
 Identities = 81/111 (72%), Positives = 90/111 (81%), Gaps = 2/111 (1%)
 Frame = -3

Query: 332 ALSLFRDML--GGGVKPDGTTMVCVLSAVSRMGVLESGVCVHGYIEKMLYEPENDVYVGT 159
           AL LFR ML    GVKP  TTMVCVLSA S++GVLE+GV VHGYIEK +  P NDV+VGT
Sbjct: 196 ALVLFRAMLVDACGVKPTDTTMVCVLSAASQLGVLETGVGVHGYIEKTVLAPANDVFVGT 255

Query: 158 GLVDMYSKCGCVDGAMWIFERMKERNVLTWTAMTSGLAIHGRGKEALEVLD 6
           GLVDMYSKCGC+  A+ IF  MKERNVLTWTAM +GLA HGRGKEALE+LD
Sbjct: 256 GLVDMYSKCGCLGSALCIFWGMKERNVLTWTAMITGLARHGRGKEALELLD 306


>ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18970-like [Glycine max]
          Length = 477

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/110 (64%), Positives = 92/110 (83%), Gaps = 2/110 (1%)
 Frame = -3

Query: 332 ALSLFRDMLG--GGVKPDGTTMVCVLSAVSRMGVLESGVCVHGYIEKMLYEPENDVYVGT 159
           ALSLF DML     +KP GTT+V VLSAVS++G+LE+G C+HG+ EK +  PE+DV++GT
Sbjct: 198 ALSLFIDMLVDVSVIKPTGTTIVSVLSAVSQIGMLETGACIHGFAEKTVCTPEDDVFIGT 257

Query: 158 GLVDMYSKCGCVDGAMWIFERMKERNVLTWTAMTSGLAIHGRGKEALEVL 9
           GLVDMYSKCGC+D A+ +F RM ++N+LTWTAMT+ LAIHG+GK+ALEVL
Sbjct: 258 GLVDMYSKCGCLDSALSVFWRMNQKNILTWTAMTTSLAIHGKGKQALEVL 307


>ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18970-like [Glycine max]
          Length = 595

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/110 (62%), Positives = 92/110 (83%), Gaps = 2/110 (1%)
 Frame = -3

Query: 332 ALSLFRDML--GGGVKPDGTTMVCVLSAVSRMGVLESGVCVHGYIEKMLYEPENDVYVGT 159
           AL LF DML    G+KP  TT+V VLSAVS++G+LE+G C+HG+ EK +  PE+DV++GT
Sbjct: 318 ALYLFIDMLIDVSGIKPTATTIVSVLSAVSQIGMLETGACIHGFAEKTVCTPEDDVFIGT 377

Query: 158 GLVDMYSKCGCVDGAMWIFERMKERNVLTWTAMTSGLAIHGRGKEALEVL 9
           GLVDMYSKCGC+D A+ +F RM ++N++TWTAMT+GLAIHG+GK++LEVL
Sbjct: 378 GLVDMYSKCGCLDSALSVFWRMNQKNIMTWTAMTTGLAIHGKGKQSLEVL 427


>ref|XP_002531295.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529128|gb|EEF31108.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 313

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/116 (61%), Positives = 88/116 (75%), Gaps = 2/116 (1%)
 Frame = -3

Query: 347 DACWVALSLFRDMLGG--GVKPDGTTMVCVLSAVSRMGVLESGVCVHGYIEKMLYEPEND 174
           D+   AL LFRDM+      KP+  TMV VLSA S++GVLE G C+HGYIEK +  P+ND
Sbjct: 25  DSAVAALMLFRDMVVDVCAEKPNDITMVSVLSASSQLGVLECGACIHGYIEKTICVPQND 84

Query: 173 VYVGTGLVDMYSKCGCVDGAMWIFERMKERNVLTWTAMTSGLAIHGRGKEALEVLD 6
           +++GTGLVDMYSKCGC+D A+  F  MK +N LTWTAM +GLAIHG+GKE LE+LD
Sbjct: 85  IFIGTGLVDMYSKCGCLDSAVKFFVEMKLKNKLTWTAMATGLAIHGKGKETLELLD 140


>ref|XP_004135653.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18970-like [Cucumis sativus]
           gi|449522917|ref|XP_004168472.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g18970-like [Cucumis sativus]
          Length = 318

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/113 (61%), Positives = 90/113 (79%), Gaps = 4/113 (3%)
 Frame = -3

Query: 332 ALSLFRDMLGGG----VKPDGTTMVCVLSAVSRMGVLESGVCVHGYIEKMLYEPENDVYV 165
           AL LFR ML       VKP  TTMVC+LSA S++G+LE+G CVH YI+K +  PE DV++
Sbjct: 31  ALELFRGMLVESTNFEVKPTDTTMVCILSAASQLGMLETGSCVHAYIKKTVDSPEKDVFI 90

Query: 164 GTGLVDMYSKCGCVDGAMWIFERMKERNVLTWTAMTSGLAIHGRGKEALEVLD 6
           GTGLV+MYSKCG ++ A  +F++MK++NVLTWT+M +GLA+HGRGKEALE+LD
Sbjct: 91  GTGLVNMYSKCGLLNSASSVFKQMKQKNVLTWTSMATGLAVHGRGKEALELLD 143


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