BLASTX nr result

ID: Angelica22_contig00032245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032245
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   117   2e-24
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   100   3e-19
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    96   7e-18
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    95   1e-17
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    91   2e-16

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  117 bits (293), Expect = 2e-24
 Identities = 56/175 (32%), Positives = 94/175 (53%)
 Frame = +3

Query: 105 WYIWKNRNEVAWNNRWGRPDVVIRQAKESLIQ*QKAQSTRQIAGSRSSSSEVEKWKKPSP 284
           W IW+ RN+  W+ +    ++ ++ A+E L Q Q A+++      +S    +  W+ P+ 
Sbjct: 4   WCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSATTQVQQSPQDTIA-WQPPAA 62

Query: 285 GVLKCNVDASIFPDKGYSSFGFVIRDANGVCVKAVNGAFRGVFAPMLAEAIAFKEALAWI 464
           G LKCNVDA+IF ++     G  +RD  G  +KA    + G   P  AEA+  ++A+ W+
Sbjct: 63  GFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWL 122

Query: 465 KSANIENIHIETDCQTVVTTLQSHGQDSSYFGSTVVDCVDGLEAISNASFSFVRR 629
               + N+ +E DC+ VV ++     + + FGS + DC   L+  +N   SFVRR
Sbjct: 123 GQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRR 177


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  100 bits (248), Expect = 3e-19
 Identities = 61/178 (34%), Positives = 86/178 (48%)
 Frame = +3

Query: 99   VGWYIWKNRNEVAWNNRWGRPDVVIRQAKESLIQ*QKAQSTRQIAGSRSSSSEVEKWKKP 278
            V W +W  RN+V WN R      V+      L     A  T   A +  S S   KW+KP
Sbjct: 610  VCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANETLATAVTVPSYSS--KWQKP 667

Query: 279  SPGVLKCNVDASIFPDKGYSSFGFVIRDANGVCVKAVNGAFRGVFAPMLAEAIAFKEALA 458
              G +K NVD ++FPDKG  + G V RD  G  +      F     P + EA+  +E L+
Sbjct: 668  DYGWIKINVDGAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLS 725

Query: 459  WIKSANIENIHIETDCQTVVTTLQSHGQDSSYFGSTVVDCVDGLEAISNASFSFVRRS 632
            WI   +   I +ETDC  VV  +Q     ++ FG  +VDC+D L+ + +    + RRS
Sbjct: 726  WIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRS 783


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 62/183 (33%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
 Frame = +3

Query: 96  VVGWYIWKNRNEVAWNNRWGRPDVVIRQAKESLIQ*QKA-------QSTRQIAGSRSSSS 254
           V+ W +W N N+V WN +      V  +A   L Q  KA       Q  R  AG      
Sbjct: 285 VLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKARKLTDYHQLGRHFAGGDCL-- 342

Query: 255 EVEKWKKPSPGVLKCNVDASIFPDKGYSSFGFVIRDANGVCVKAVNGAFRGVFAPMLAEA 434
               W+KP+ G  K NVDAS   ++G S   FV+RD  G+ +  V      +  P +AEA
Sbjct: 343 ----WQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEA 398

Query: 435 IAFKEALAWIKSANIENIHIETDCQTVVTTLQSHGQDSSYFGSTVVDCVDGLEAISNASF 614
            A KEAL+WI +  +E + IETDC   +  L+     +SY    + DC D L  ++  + 
Sbjct: 399 WALKEALSWIHAKGMEEVQIETDCLRNIELLEEELHPNSYLLCLLKDCQDLLRVLNRCNL 458

Query: 615 SFV 623
            FV
Sbjct: 459 VFV 461


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 58/171 (33%), Positives = 81/171 (47%)
 Frame = +3

Query: 117 KNRNEVAWNNRWGRPDVVIRQAKESLIQ*QKAQSTRQIAGSRSSSSEVEKWKKPSPGVLK 296
           K RN   W  +  +P   +  A   L     A S ++         EV     P PG +K
Sbjct: 118 KQRNLCLWEGQLQQPAQTVFCALSFLCDWASACSLQRNGNEARVMLEVLTCCPPQPGFVK 177

Query: 297 CNVDASIFPDKGYSSFGFVIRDANGVCVKAVNGAFRGVFAPMLAEAIAFKEALAWIKSAN 476
           CNVD ++F   G S FG VIRD+ G  V   +G+  G+F   LAEAI  +EA+ W+ S  
Sbjct: 178 CNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLG 237

Query: 477 IENIHIETDCQTVVTTLQSHGQDSSYFGSTVVDCVDGLEAISNASFSFVRR 629
             N+  E D + VV  + S   D   FG+ + DC   L+   N S  F+R+
Sbjct: 238 RSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRK 288


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/122 (38%), Positives = 69/122 (56%)
 Frame = +3

Query: 267 WKKPSPGVLKCNVDASIFPDKGYSSFGFVIRDANGVCVKAVNGAFRGVFAPMLAEAIAFK 446
           W  PS G +K N+DA+IF +      G V++D  G+ V A+  +F G + P +AE +A +
Sbjct: 28  WNTPSLGSMKVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQ 87

Query: 447 EALAWIKSANIENIHIETDCQTVVTTLQSHGQDSSYFGSTVVDCVDGLEAISNASFSFVR 626
           EAL+W +   + N+  E DC  +V  L   G D S  G  + DC     +ISN SF+FV+
Sbjct: 88  EALSWARDRQLLNVVFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSSSISNCSFAFVK 147

Query: 627 RS 632
           RS
Sbjct: 148 RS 149


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