BLASTX nr result

ID: Angelica22_contig00032208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00032208
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...   218   4e-55
ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-l...   218   5e-55
ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-l...   218   5e-55
ref|XP_002531128.1| exosome complex exonuclease rrp45, putative ...   217   7e-55
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]   211   4e-53

>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score =  218 bits (555), Expect = 4e-55
 Identities = 105/127 (82%), Positives = 112/127 (88%)
 Frame = +2

Query: 2   FGREDGSSEVQLGQTHVMGVVTSQLVQPYRDRPNEGTLSIYTELSPMADPSFEAGRPGES 181
           FGREDGSSEVQLGQTHVMG VT QL+QPYRDRPNEGTLSIYTE SPMADPSFEAGRPGE+
Sbjct: 44  FGREDGSSEVQLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEA 103

Query: 182 AVELGRIIDRGLRESRAVDTESLCVVAGKLVWSIRIDIHILDNGGNLVDXXXXXXXXXXS 361
           AVELGR+IDRGLRESRAVD ESLCV+AGKLVWSIRID+HI+DNGGNL+D           
Sbjct: 104 AVELGRVIDRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALL 163

Query: 362 TFRRPEC 382
           TFRRPEC
Sbjct: 164 TFRRPEC 170


>ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 454

 Score =  218 bits (554), Expect = 5e-55
 Identities = 105/127 (82%), Positives = 113/127 (88%)
 Frame = +2

Query: 2   FGREDGSSEVQLGQTHVMGVVTSQLVQPYRDRPNEGTLSIYTELSPMADPSFEAGRPGES 181
           FG++DGSSEVQLGQTHVMG VT+QLVQPYRDRPNEGTLSIYTE SPMADPSFE GRPGES
Sbjct: 44  FGKDDGSSEVQLGQTHVMGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGES 103

Query: 182 AVELGRIIDRGLRESRAVDTESLCVVAGKLVWSIRIDIHILDNGGNLVDXXXXXXXXXXS 361
           AVELGR+IDRGLRESRAVDTESLCVV+GK VW+IR+D+HILDNGGNLVD          S
Sbjct: 104 AVELGRVIDRGLRESRAVDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALS 163

Query: 362 TFRRPEC 382
           TFRRPEC
Sbjct: 164 TFRRPEC 170


>ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 452

 Score =  218 bits (554), Expect = 5e-55
 Identities = 105/127 (82%), Positives = 113/127 (88%)
 Frame = +2

Query: 2   FGREDGSSEVQLGQTHVMGVVTSQLVQPYRDRPNEGTLSIYTELSPMADPSFEAGRPGES 181
           FG++DGSSEVQLGQTHVMG VT+QLVQPYRDRPNEGTLSIYTE SPMADPSFE GRPGES
Sbjct: 44  FGKDDGSSEVQLGQTHVMGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGES 103

Query: 182 AVELGRIIDRGLRESRAVDTESLCVVAGKLVWSIRIDIHILDNGGNLVDXXXXXXXXXXS 361
           AVELGR+IDRGLRESRAVDTESLCVV+GK VW+IR+D+HILDNGGNLVD          S
Sbjct: 104 AVELGRVIDRGLRESRAVDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALS 163

Query: 362 TFRRPEC 382
           TFRRPEC
Sbjct: 164 TFRRPEC 170


>ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
           gi|223529292|gb|EEF31262.1| exosome complex exonuclease
           rrp45, putative [Ricinus communis]
          Length = 463

 Score =  217 bits (553), Expect = 7e-55
 Identities = 107/127 (84%), Positives = 113/127 (88%)
 Frame = +2

Query: 2   FGREDGSSEVQLGQTHVMGVVTSQLVQPYRDRPNEGTLSIYTELSPMADPSFEAGRPGES 181
           FGREDGSSEVQLGQTHVMG VTSQLVQPYRDRPNEG+LSI++E SPMADPSFE GRPGES
Sbjct: 44  FGREDGSSEVQLGQTHVMGFVTSQLVQPYRDRPNEGSLSIFSEFSPMADPSFEPGRPGES 103

Query: 182 AVELGRIIDRGLRESRAVDTESLCVVAGKLVWSIRIDIHILDNGGNLVDXXXXXXXXXXS 361
           AVELGRIIDRGLRESRAVDTESLCV+AGKLVW+IRID+HILDNGGNLVD           
Sbjct: 104 AVELGRIIDRGLRESRAVDTESLCVLAGKLVWAIRIDLHILDNGGNLVDAANIAALAALL 163

Query: 362 TFRRPEC 382
           TFRRPEC
Sbjct: 164 TFRRPEC 170


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score =  211 bits (538), Expect = 4e-53
 Identities = 102/124 (82%), Positives = 109/124 (87%)
 Frame = +2

Query: 11  EDGSSEVQLGQTHVMGVVTSQLVQPYRDRPNEGTLSIYTELSPMADPSFEAGRPGESAVE 190
           EDGSSEVQLGQTHVMG VT QL+QPYRDRPNEGTLSIYTE SPMADPSFEAGRPGE+AVE
Sbjct: 56  EDGSSEVQLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVE 115

Query: 191 LGRIIDRGLRESRAVDTESLCVVAGKLVWSIRIDIHILDNGGNLVDXXXXXXXXXXSTFR 370
           LGR+IDRGLRESRAVD ESLCV+AGKLVWSIRID+HI+DNGGNL+D           TFR
Sbjct: 116 LGRVIDRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFR 175

Query: 371 RPEC 382
           RPEC
Sbjct: 176 RPEC 179


Top