BLASTX nr result

ID: Angelica22_contig00031964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031964
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_02617727.1| conserved hypothetical protein [Clostridium b...    57   3e-06
ref|XP_003513577.1| PREDICTED: E3 ubiquitin-protein ligase TRIM2...    55   9e-06

>ref|ZP_02617727.1| conserved hypothetical protein [Clostridium botulinum Bf]
           gi|182673850|gb|EDT85811.1| conserved hypothetical
           protein [Clostridium botulinum Bf]
          Length = 918

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/173 (23%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
 Frame = -2

Query: 622 VKRREGDVKKVEKKQPFMENKKYRSVEQVDLMKVKRRGKNVDKK-SFVENESDSSVKEVD 446
           +K +    K V K    ++N++ + V +V++ + + + K + KK +  ENE +  + +V+
Sbjct: 387 IKLKTEKSKHVPKVNVELKNERSKQVPKVNVERKEEKSKQIIKKHNESENEKNKQIPKVN 446

Query: 445 IRLDGARPSRNVKENGKL-ERKGKNVENVKKQKLECERNNSVEDVDLRPDGGRFPRNVKE 269
           + L   R  +  K N +L E K K +   K  + E E+N  +  V++     +  + +KE
Sbjct: 447 VELKNERSKQLPKVNVELKEEKSKQIIK-KHNESENEKNKQITKVNVELRNEKSKQIIKE 505

Query: 268 NGKLERRAKDLKNLKKEKSYKENERDGSMGELGLRSEKLVEVSNKKKRCLSEK 110
           + +L++        ++ +S  E  +  S G +GL+ EK  +VS +     ++K
Sbjct: 506 HNELKKEKNKQIIKEQNESKDEKSKQVSKGNIGLKKEKNKQVSKEHNELNNDK 558


>ref|XP_003513577.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Cricetulus
           griseus] gi|344251727|gb|EGW07831.1| ADP-ribosylation
           factor-like protein 9 [Cricetulus griseus]
          Length = 411

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 49/166 (29%), Positives = 85/166 (51%)
 Frame = -2

Query: 622 VKRREGDVKKVEKKQPFMENKKYRSVEQVDLMKVKRRGKNVDKKSFVENESDSSVKEVDI 443
           VK+ +         +  ++++K +  +    +K K +GK  +K   V+N+   SVKE + 
Sbjct: 6   VKKEKEKFSSSSSSRETVKSEKEKRKDVEIKIKGKEKGKEDEKTVEVKNKKKESVKEEEK 65

Query: 442 RLDGARPSRNVKENGKLERKGKNVENVKKQKLECERNNSVEDVDLRPDGGRFPRNVKENG 263
           R D  +   N KE+GK E K K+VE    QK +  + +  E+ + R D G+  +N    G
Sbjct: 66  RKDVEQKGDNEKESGKEEEKRKDVE----QKSDNGKESGTEE-EKRKDVGQ--KNDNGKG 118

Query: 262 KLERRAKDLKNLKKEKSYKENERDGSMGELGLRSEKLVEVSNKKKR 125
           K E + K L +LK +   KE E+  S+ +L L+ +  V+   ++KR
Sbjct: 119 KEEEKRKSL-DLKLKVKGKEEEKRKSV-DLKLKEKMKVKGKEEEKR 162


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