BLASTX nr result

ID: Angelica22_contig00031833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031833
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              75   7e-12
gb|AAD20431.1| putative retroelement pol polyprotein [Arabidopsi...    75   7e-12
emb|CAN71422.1| hypothetical protein VITISV_013240 [Vitis vinifera]    64   1e-08
emb|CAN69925.1| hypothetical protein VITISV_027208 [Vitis vinifera]    64   1e-08
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      64   2e-08

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 10/112 (8%)
 Frame = +3

Query: 9    YLKSVLELVRKFKEVKLIKIPRGENATADALSKWGSQKDTNILGVIPLEVLERPSVLEPN 188
            YLK V  + + F+  KL KIPRG+NA ADAL+      D+++  +IP+E +++PS+   +
Sbjct: 1346 YLKIVQLMTKDFENFKLSKIPRGDNAPADALAALALTSDSDLRRIIPVESIDKPSIDSTD 1405

Query: 189  VMQV----------DVGTQVTWITPIWNYIKHGTLPGDKVEARKLCYKSARY 314
             +++          D      W   I +Y+  GTLP DK  AR+L  K+A+Y
Sbjct: 1406 AVEIVNTIRSSNAPDPADPTDWRVEIRDYLSDGTLPSDKWTARRLRIKAAKY 1457


>gb|AAD20431.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 353

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 17/128 (13%)
 Frame = +3

Query: 9   YLKSVLELVRKFKEVKLIKIPRGENATADALSKWGSQKDTNILGVIPLEVLERPSVLEPN 188
           YL  V +  ++F E KL +IPRGEN +ADAL+   S  D N+  VIP+E +E+PS+    
Sbjct: 4   YLALVQDHAKQFHEFKLTRIPRGENTSADALAALASTSDLNMRRVIPVEFIEKPSIELDK 63

Query: 189 V-----MQV------------DVGTQVTWITPIWNYIKHGTLPGDKVEARKLCYKSARYV 317
           V     +QV             +G    WI PI N+I    +  DK EARKL  ++AR+V
Sbjct: 64  VEHAFPIQVVAGYEDASDNSPSLGCDSEWIEPIRNFISKRKVRLDKWEARKLKAEAARFV 123

Query: 318 EYDGLLYK 341
             +  L+K
Sbjct: 124 LVEEKLFK 131


>emb|CAN71422.1| hypothetical protein VITISV_013240 [Vitis vinifera]
          Length = 901

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = +3

Query: 9   YLKSVLELVRKFKEVKLIKIPRGENATADALSKWGSQKDTNILGVIPLEVLERPSVLEP- 185
           YL  V + +++F E  + KI R EN  ADAL+   +        ++P+ V   PSV E  
Sbjct: 495 YLTKVRDTLQRFTEWTIEKIKRTENGRADALAGIAASLPIKEAILLPVHVQTNPSVAETS 554

Query: 186 --NVMQVDVGTQVTWITPIWNYIKHGTLPGDKVEARKLCYKSARYVEYDGLLYK 341
             N+++        W   I  Y++ GTLPGD  +A K+  ++AR+    G LYK
Sbjct: 555 TCNIIEASKADDQEWTNSITEYLRTGTLPGDPKQAHKVRVQAARFTIIGGHLYK 608


>emb|CAN69925.1| hypothetical protein VITISV_027208 [Vitis vinifera]
          Length = 982

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = +3

Query: 9   YLKSVLELVRKFKEVKLIKIPRGENATADALSKWGSQKDTNILGVIPLEVLERPSVLEPN 188
           YL  V + +++F E  + KI R EN  ADAL+   +        ++P+ V   PSV E +
Sbjct: 530 YLTKVRDTLQRFTEWTIEKIRRTENGRADALAGIAASLPIKEAILLPVHVQTNPSVAETS 589

Query: 189 VMQVDVGTQVT---WITPIWNYIKHGTLPGDKVEARKLCYKSARYVEYDGLLYK 341
                  TQ     W   I  Y++ GTLPGD  +A K+  ++AR+   +G LYK
Sbjct: 590 TCNAIEATQADSQEWTNNITEYLRTGTLPGDPKQAHKVRVQAARFTIIEGHLYK 643


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/111 (33%), Positives = 58/111 (52%)
 Frame = +3

Query: 9    YLKSVLELVRKFKEVKLIKIPRGENATADALSKWGSQKDTNILGVIPLEVLERPSVLEPN 188
            YL+ V     K K  ++  IPR EN  AD LSK  S    N+   + +++    S+ E  
Sbjct: 826  YLERVKADTAKLKSFQIQCIPRSENNRADTLSKLTSSTIKNVSRTVLVDIRNAKSITETV 885

Query: 189  VMQVDVGTQVTWITPIWNYIKHGTLPGDKVEARKLCYKSARYVEYDGLLYK 341
             M  D+  + TW+TPI  Y     LP D+  ++K+   +ARY+ ++G LY+
Sbjct: 886  GMVGDIEAETTWMTPIMKYKLTKGLPEDRSLSQKIKRIAARYLVFEGELYR 936


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