BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031610
         (1585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   400   e-156
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     390   e-155
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   391   e-152
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   374   e-149
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   362   e-145

>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  400 bits (1028), Expect(2) = e-156
 Identities = 190/253 (75%), Positives = 222/253 (87%)
 Frame = +2

Query: 620  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 799
            RG++PM++GI + K  CP ++ ++D+MS +PYASAIGSIMYAMICTRPDVSYALS+TSRY
Sbjct: 643  RGFLPMAHGINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRY 702

Query: 800  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 979
            Q++P EGHWTAVKNILKYL+RTKD FL+YG DE+LVV GYTDASFQTD+DD  S+SGFVF
Sbjct: 703  QADPSEGHWTAVKNILKYLRRTKDVFLVYGGDEELVVNGYTDASFQTDKDDYRSQSGFVF 762

Query: 980  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 1159
             LNGG VSWKSSKQETVADST EAEYI ASEAAKE VWIRNFIT LG+VPS + P+DLYC
Sbjct: 763  ILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSASSPMDLYC 822

Query: 1160 DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHTNDNVADALTKALSQQK 1339
            DNNGAIAQAKEPRSH K+KHILRRYHL+RE+ D GD+ ICKVHT+ N+AD LTK L+Q K
Sbjct: 823  DNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKVHTDLNIADPLTKPLTQPK 882

Query: 1340 HEGHTSSMGIRYM 1378
            HE HT ++GIRY+
Sbjct: 883  HEAHTRAIGIRYL 895



 Score =  179 bits (455), Expect(2) = e-156
 Identities = 88/121 (72%), Positives = 103/121 (85%)
 Frame = +3

Query: 264 RRSIYGLKQASRRWNIHFDETVKEFGFIQNEDESCVYKKVSGSHVAFLVLYVDDILLIGN 443
           ++SIYGLKQASR WNI FDE +K FGFI+N++E CVY KVSGS +  L+LYVDDILL+GN
Sbjct: 521 QKSIYGLKQASRSWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVGN 580

Query: 444 DIPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQE 623
           DIP L +VK+ LRKSFSMKDLG+A YILGIRIY+D SKRLIGLSQ  YIDKVL+RF MQ 
Sbjct: 581 DIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQN 640

Query: 624 A 626
           +
Sbjct: 641 S 641


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  390 bits (1003), Expect(2) = e-155
 Identities = 186/255 (72%), Positives = 218/255 (85%)
 Frame = +2

Query: 620  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 799
            +G++PMS+GI + K  CP++  ++++M  VPYASAIGSIMYAM+CTRPDVSYALS TSRY
Sbjct: 1063 KGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRY 1122

Query: 800  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 979
            QS+PGEGHWTAVKNILKYL+RTKD FL+YG +E LVV GYTDASFQTD+DD  S+SGFVF
Sbjct: 1123 QSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASFQTDKDDYRSQSGFVF 1182

Query: 980  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 1159
            CLNGG VSWKSSKQ+TVADST EAEYI ASEAAKEAVWI+ F++ LGV+ S   P+ LYC
Sbjct: 1183 CLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTGPMSLYC 1242

Query: 1160 DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHTNDNVADALTKALSQQK 1339
            DN+GAIAQAKEPRSH K+KHILRRYHL+REI D GD+ ICKVHT+ N+AD LTK L Q K
Sbjct: 1243 DNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPLTKPLPQPK 1302

Query: 1340 HEGHTSSMGIRYMGD 1384
            HE HT +MGIRY+ D
Sbjct: 1303 HEAHTRAMGIRYLHD 1317



 Score =  186 bits (471), Expect(2) = e-155
 Identities = 91/121 (75%), Positives = 105/121 (86%)
 Frame = +3

Query: 264  RRSIYGLKQASRRWNIHFDETVKEFGFIQNEDESCVYKKVSGSHVAFLVLYVDDILLIGN 443
            ++SIYGLKQASR WNI FDE +K FGFI+NE+E+CVYKKVSGS + FL+LYVDDILLIGN
Sbjct: 941  QKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGN 1000

Query: 444  DIPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQE 623
            DIP L +VK+ L+ SFSMKDLG A YILGIRIY+D SKRLIGLSQSTYIDKVL RF M +
Sbjct: 1001 DIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHD 1060

Query: 624  A 626
            +
Sbjct: 1061 S 1061


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  391 bits (1005), Expect(2) = e-152
 Identities = 189/255 (74%), Positives = 220/255 (86%)
 Frame = +2

Query: 620  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 799
            +G++PMS+GI   K   P ++ ++DRM+ +PYASAIGSIMYAMICTR DVSYALS+TSRY
Sbjct: 1059 KGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRY 1118

Query: 800  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 979
            Q++PGE HWTAVKNILKYL+RTKD+FLIYG DE+LVV GYTDASFQTD+DD  S+SGFVF
Sbjct: 1119 QADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVVNGYTDASFQTDKDDYRSQSGFVF 1178

Query: 980  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 1159
             LNGG VSWKSSKQETVADST +AEYI ASEAAKE VWIRNFI  LGVVPS + P+DLYC
Sbjct: 1179 ILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVPSASSPMDLYC 1238

Query: 1160 DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHTNDNVADALTKALSQQK 1339
            DNNGAIAQAKEPRSH K+KHILRRYHL+RE+ D GD+ ICK+HT+ NVAD LTK L+Q K
Sbjct: 1239 DNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHTDLNVADPLTKPLTQPK 1298

Query: 1340 HEGHTSSMGIRYMGD 1384
            HE HT ++GIRY+ D
Sbjct: 1299 HEAHTRAIGIRYLND 1313



 Score =  175 bits (444), Expect(2) = e-152
 Identities = 86/119 (72%), Positives = 100/119 (84%)
 Frame = +3

Query: 264  RRSIYGLKQASRRWNIHFDETVKEFGFIQNEDESCVYKKVSGSHVAFLVLYVDDILLIGN 443
            ++SIYGLKQASR WNI FDE +K FGF++N++E CVY KVSGS +  L+LYVDDILLIGN
Sbjct: 937  QKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIGN 996

Query: 444  DIPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQ 620
            DIP L +VK  L+ SFSMKDLG A YILGI+IY+D S+RLIGLSQSTYIDKVL RF MQ
Sbjct: 997  DIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQ 1055


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  374 bits (960), Expect(2) = e-149
 Identities = 178/253 (70%), Positives = 211/253 (83%)
 Frame = +2

Query: 620  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 799
            +G++PMS+GI + K  CP +  +++RMSK+PYASAIGSIMYAM+ TRPDV+ ALSMTSRY
Sbjct: 710  KGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRY 769

Query: 800  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 979
            QS+PGE HW  V+NI KYL+RTKD FL+YG  E+LVV GYTDASFQTD+DD  S+SGF F
Sbjct: 770  QSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQSGFFF 829

Query: 980  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 1159
            CLNGG VSWKS+KQ TVADST EAEYI ASEAAKE VWIR FIT LGVVPSI+ P+DLYC
Sbjct: 830  CLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISGPIDLYC 889

Query: 1160 DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHTNDNVADALTKALSQQK 1339
            DNNGAIAQAKEP+SH K+KHI RRYHL+REI D GD+ I +V T+ NVAD  TK L Q K
Sbjct: 890  DNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPLPQPK 949

Query: 1340 HEGHTSSMGIRYM 1378
            HE HT+++GIR++
Sbjct: 950  HESHTTAIGIRFI 962



 Score =  181 bits (459), Expect(2) = e-149
 Identities = 87/120 (72%), Positives = 100/120 (83%)
 Frame = +3

Query: 267 RSIYGLKQASRRWNIHFDETVKEFGFIQNEDESCVYKKVSGSHVAFLVLYVDDILLIGND 446
           RSIYGLKQASR WN+ F+E +KEF FI+NE+E CVYKK SGS VAFLVLYVDDILL+GND
Sbjct: 589 RSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGND 648

Query: 447 IPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQEA 626
           IP L +VKTWL   FSMKD+G A YILGIRIY+D   ++IGLSQ TYIDKVLHRF M ++
Sbjct: 649 IPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDS 708


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  362 bits (929), Expect(2) = e-145
 Identities = 175/255 (68%), Positives = 210/255 (82%)
 Frame = +2

Query: 620  RGYVPMSNGIVILKENCPKSSYDKDRMSKVPYASAIGSIMYAMICTRPDVSYALSMTSRY 799
            +G++PMS+GI + K  CP+++ ++++MS +PYASAIGSIMYAM+CTRPDVSYALS TSRY
Sbjct: 934  KGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRY 993

Query: 800  QSNPGEGHWTAVKNILKYLKRTKDSFLIYGEDEKLVVRGYTDASFQTDRDDTVSRSGFVF 979
            QS+PGE HW AVKNILKYL+RTKD FL YG  E+LVV GYTDASFQ D+DD  S+SGFVF
Sbjct: 994  QSDPGESHWIAVKNILKYLRRTKDMFLAYGGQEELVVNGYTDASFQIDKDDFRSQSGFVF 1053

Query: 980  CLNGGTVSWKSSKQETVADSTMEAEYITASEAAKEAVWIRNFITGLGVVPSIADPVDLYC 1159
            CLNGG VSWKSSKQ+ V DST EAEYI    AA EAVWI+ F++ LGV+ S +  +DLYC
Sbjct: 1054 CLNGGAVSWKSSKQDIVVDSTTEAEYI----AASEAVWIKKFVSQLGVMTSASSSMDLYC 1109

Query: 1160 DNNGAIAQAKEPRSHSKAKHILRRYHLLREINDIGDIHICKVHTNDNVADALTKALSQQK 1339
            DN+GAIAQAKEPRSH K+KHILR+YHL+REI   GD+ ICK+HT+ NVAD LTK L Q K
Sbjct: 1110 DNSGAIAQAKEPRSHQKSKHILRQYHLIREIVGRGDVKICKIHTDLNVADPLTKPLPQPK 1169

Query: 1340 HEGHTSSMGIRYMGD 1384
            HE HT +MGIRY+ D
Sbjct: 1170 HEAHTRAMGIRYIHD 1184



 Score =  181 bits (460), Expect(2) = e-145
 Identities = 90/120 (75%), Positives = 102/120 (85%)
 Frame = +3

Query: 267  RSIYGLKQASRRWNIHFDETVKEFGFIQNEDESCVYKKVSGSHVAFLVLYVDDILLIGND 446
            +SIYGLKQASR WNI FDE VK  GF++NE+E CVYKK+SGS + FL+LYVDDILLIGND
Sbjct: 813  QSIYGLKQASRSWNIRFDEVVKALGFVRNEEEPCVYKKISGSALVFLILYVDDILLIGND 872

Query: 447  IPSL*AVKTWLRKSFSMKDLGNATYILGIRIYKDISKRLIGLSQSTYIDKVLHRFGMQEA 626
            I  L +VKT L+ SFSMKDLG A YILGIRIY+D SKRLIGLSQSTYIDKVL RF MQ++
Sbjct: 873  ISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDS 932