BLASTX nr result

ID: Angelica22_contig00031596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031596
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat...   122   2e-26
ref|XP_002521068.1| pentatricopeptide repeat-containing protein,...   121   7e-26
ref|XP_002301797.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|NP_189142.1| pentatricopeptide repeat-containing protein [Ar...   111   5e-23
ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/106 (57%), Positives = 75/106 (70%)
 Frame = -1

Query: 321 LSLARALFNAIKLRDSILWNTMIAGYGMHGHGKEALSLFLDMTETKSKPDDTTFXXXXXX 142
           LS AR +F+ I  RDSI WN +IA YG+HG G+EALSLFL M ET  KPD  TF      
Sbjct: 357 LSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSA 416

Query: 141 XXXXXLVDEGQYWFNIMVSKYNIQPSVKHNAVMVDLLARAGHVKQA 4
                LV++G+YWF+IMV++Y IQPS KH A MVDLL+RAG V++A
Sbjct: 417 FSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEA 462


>ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539637|gb|EEF41219.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 579

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/107 (57%), Positives = 74/107 (69%)
 Frame = -1

Query: 321 LSLARALFNAIKLRDSILWNTMIAGYGMHGHGKEALSLFLDMTETKSKPDDTTFXXXXXX 142
           L+ ARALF+ I+ RD ILWN MI+ YG+HG G EALSLFL M ET   PD  TF      
Sbjct: 336 LTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSA 395

Query: 141 XXXXXLVDEGQYWFNIMVSKYNIQPSVKHNAVMVDLLARAGHVKQAY 1
                LV+EGQYWF++++ K  IQPS KH A MVDLL+RAG V++AY
Sbjct: 396 CSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAY 442


>ref|XP_002301797.1| predicted protein [Populus trichocarpa] gi|222843523|gb|EEE81070.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/107 (55%), Positives = 68/107 (63%)
 Frame = -1

Query: 321 LSLARALFNAIKLRDSILWNTMIAGYGMHGHGKEALSLFLDMTETKSKPDDTTFXXXXXX 142
           LS A A+F+ +  RD ILWNTMIA YG+HG GKE LSLFL M E    PD  TF      
Sbjct: 359 LSCAHAIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSA 418

Query: 141 XXXXXLVDEGQYWFNIMVSKYNIQPSVKHNAVMVDLLARAGHVKQAY 1
                 VD GQYWFN MV++  I PS KH A MVDL +RAG V++AY
Sbjct: 419 LSHSGQVDVGQYWFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEAY 465


>ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g25060, mitochondrial; Flags: Precursor
           gi|9293988|dbj|BAB01891.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643452|gb|AEE76973.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 601

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/106 (48%), Positives = 74/106 (69%)
 Frame = -1

Query: 321 LSLARALFNAIKLRDSILWNTMIAGYGMHGHGKEALSLFLDMTETKSKPDDTTFXXXXXX 142
           LS +R +F  +  +D + WNTMI+ YG+HG+G+E +SLFL MTE+  +PD  TF      
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSA 427

Query: 141 XXXXXLVDEGQYWFNIMVSKYNIQPSVKHNAVMVDLLARAGHVKQA 4
                LV++GQ+WF++M++KY IQPS KH   ++DLLARAG V++A
Sbjct: 428 LSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473


>ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/107 (48%), Positives = 68/107 (63%)
 Frame = -1

Query: 321 LSLARALFNAIKLRDSILWNTMIAGYGMHGHGKEALSLFLDMTETKSKPDDTTFXXXXXX 142
           + L+R +F+ +  RD + WNTMIAGYG+HG GKEA +LFLDM     +PDD TF      
Sbjct: 487 IDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISA 546

Query: 141 XXXXXLVDEGQYWFNIMVSKYNIQPSVKHNAVMVDLLARAGHVKQAY 1
                LV EG+ WF++M  KY I P ++H   MVDLLAR G + +AY
Sbjct: 547 CSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAY 593


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