BLASTX nr result

ID: Angelica22_contig00031485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031485
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...    75   4e-12
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    72   4e-11
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...    60   2e-07
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...    60   2e-07
ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyr...    59   3e-07

>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
           gi|223543360|gb|EEF44891.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2145

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/76 (53%), Positives = 51/76 (67%)
 Frame = +3

Query: 39  STSNKRPLPRMKKKMCLESLREYICRSCGGVLEEGWSVEFKNSRSNDELDVVYCAPDGKK 218
           ST+NK P  R   ++ L+ LRE+I     G+L+EGW VE KNS S  E+ V YC+PDGK 
Sbjct: 256 STANKLP-SRSPNEILLQGLREFISER-HGILDEGWHVELKNSVSGCEVFVAYCSPDGKT 313

Query: 219 FESMLEVARYLGLNPT 266
           F SM EVA YLGL P+
Sbjct: 314 FGSMAEVACYLGLTPS 329


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
 Frame = +3

Query: 30  RFKSTSNK--RPLPRMKKKMCLESLREYICRSCGGVLEEGWSVEFKNSRSNDELDVVYCA 203
           R +S++N   R  P+   +M L++L+E+I     GVLEEGW VE K S    EL  V+CA
Sbjct: 225 RLRSSNNTACRLPPQEPSEMLLQALKEFISER-HGVLEEGWRVELKQSVRAGELCPVFCA 283

Query: 204 PDGKKFESMLEVARYLGLNPTADTTECERSYEFDGSVS 317
           PDG+ FESM EVA YLGL    ++ + E     DGS S
Sbjct: 284 PDGRIFESMSEVAVYLGLTSNCNSVDTE--IRSDGSAS 319


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/57 (56%), Positives = 39/57 (68%)
 Frame = +3

Query: 87  LESLREYICRSCGGVLEEGWSVEFKNSRSNDELDVVYCAPDGKKFESMLEVARYLGL 257
           L++LRE+I     GVLEEGW VE K S  + EL  +Y APDGK F S+ EVA +LGL
Sbjct: 374 LQALREFISER-NGVLEEGWCVEIKQSVDSSELYAIYRAPDGKTFGSVYEVACHLGL 429


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 2131

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/57 (56%), Positives = 39/57 (68%)
 Frame = +3

Query: 87  LESLREYICRSCGGVLEEGWSVEFKNSRSNDELDVVYCAPDGKKFESMLEVARYLGL 257
           L++LRE+I     GVLEEGW VE K S  + EL  +Y APDGK F S+ EVA +LGL
Sbjct: 263 LQALREFISER-NGVLEEGWCVEIKQSVDSSELYAIYRAPDGKTFGSVYEVACHLGL 318


>ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyrata subsp. lyrata]
           gi|297330119|gb|EFH60538.1| methyl-CpG-binding domain 9
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2183

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/60 (50%), Positives = 41/60 (68%)
 Frame = +3

Query: 78  KMCLESLREYICRSCGGVLEEGWSVEFKNSRSNDELDVVYCAPDGKKFESMLEVARYLGL 257
           ++ L++LR +I     GVLE+GW VEFK   +  +L  VYCAP+GK F S+ +VA YLGL
Sbjct: 251 ELFLQNLRHFISER-HGVLEDGWRVEFKQPLNGYQLCAVYCAPNGKTFSSIQDVACYLGL 309


Top