BLASTX nr result

ID: Angelica22_contig00031339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031339
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         181   9e-44
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    172   4e-41
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   171   7e-41
emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera]   166   3e-39
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           165   4e-39

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  181 bits (458), Expect = 9e-44
 Identities = 88/129 (68%), Positives = 104/129 (80%), Gaps = 1/129 (0%)
 Frame = -3

Query: 560 TIEERVRCMLSLAKLPKSFWAEAVRTAVDLINLSPSVPLNGDVPEKVWTGKDISYNQLRV 381
           TI ERVRCML  AKLP SFWAEAV TAV +INLSP + L  +VP+KVW GKD+SY+ LRV
Sbjct: 586 TIMERVRCMLDDAKLPSSFWAEAVSTAVHVINLSPVIALKNEVPDKVWCGKDVSYDHLRV 645

Query: 380 FGCKAYVHVPKDERSKLDDKAKLCIFLGYGHEEFGYRLWDPVDKKVFRSRD-VFLEDQFG 204
           FGCKA+VHVP+DERSKLD K + CIF+GYG +EFGYRL+DPV+KK+ RSRD VF E+Q  
Sbjct: 646 FGCKAFVHVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQ-- 703

Query: 203 EVEKIDNAK 177
            +E ID  K
Sbjct: 704 TIEDIDKVK 712


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  172 bits (435), Expect = 4e-41
 Identities = 82/120 (68%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
 Frame = -3

Query: 560 TIEERVRCMLSLAKLPKSFWAEAVRTAVDLINLSPSVPLNGDVPEKVWTGKDISYNQLRV 381
           TI E+VR ML +AKLPK+FW EAVRTA  LIN SPSVPL  D+PE+VWT K++SY+ L+V
Sbjct: 592 TIVEKVRSMLRMAKLPKTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMSYSHLKV 651

Query: 380 FGCKAYVHVPKDERSKLDDKAKLCIFLGYGHEEFGYRLWDPVDKKVFRSRDV-FLEDQFG 204
           FGCKA+ HVPK++R+KLDDK+  CIF+GYG EEFGYRLWD V KKV RSRDV F E + G
Sbjct: 652 FGCKAFAHVPKEQRTKLDDKSVPCIFIGYGDEEFGYRLWDLVKKKVIRSRDVIFRESEVG 711


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  171 bits (433), Expect = 7e-41
 Identities = 78/116 (67%), Positives = 96/116 (82%)
 Frame = -3

Query: 560 TIEERVRCMLSLAKLPKSFWAEAVRTAVDLINLSPSVPLNGDVPEKVWTGKDISYNQLRV 381
           TI E+VR ML +AKLPKSFW EAV+TA  LIN SPSVPL  ++PE+VWT K++SY+ L+V
Sbjct: 591 TIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKV 650

Query: 380 FGCKAYVHVPKDERSKLDDKAKLCIFLGYGHEEFGYRLWDPVDKKVFRSRDVFLED 213
           FGC+A+ HVPK++R+KLDDK+  CIF+GYG EEFGYRLWDPV KKV RSRDV   +
Sbjct: 651 FGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRE 706


>emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera]
          Length = 458

 Score =  166 bits (419), Expect = 3e-39
 Identities = 81/129 (62%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
 Frame = -3

Query: 560 TIEERVRCMLSLAKLPKSFWAEAVRTAVDLINLSPSVPLNGDVPEKVWTGKDISYNQLRV 381
           TI +R++CML  AKLPKSFW EA+RT VDLINLSPS PL G + E+VWT K +S+  LRV
Sbjct: 272 TICDRIKCMLFHAKLPKSFWGEAMRTTVDLINLSPSYPLVGGILERVWTRKFVSFEHLRV 331

Query: 380 FGCKAYVHVPKDERSKLDDKAKLCIFLGYGHEEFGYRLWDPVDKKVFRSR-DVFLEDQFG 204
           FGC+A+VHV +D++SKLD K K CIFLGY +EEFGYRLWDP  KK+ RSR  VF +DQ  
Sbjct: 332 FGCRAFVHVLRDKQSKLDSKTKQCIFLGYSNEEFGYRLWDPATKKIIRSRYVVFFKDQ-- 389

Query: 203 EVEKIDNAK 177
            +E +D  K
Sbjct: 390 TIEDLDRVK 398


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  165 bits (418), Expect = 4e-39
 Identities = 77/129 (59%), Positives = 102/129 (79%), Gaps = 2/129 (1%)
 Frame = -3

Query: 560 TIEERVRCMLSLAKLPKSFWAEAVRTAVDLINLSPSVPLNGDVPEKVWTGKDISYNQLRV 381
           T+ ER RC+LS +KLPK+FW EA+ TA  ++N SP VPL    PEK+W G+DISY+QLRV
Sbjct: 588 TLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISYDQLRV 647

Query: 380 FGCKAYVHVPKDERSKLDDKAKLCIFLGYGHEEFGYRLWDPVDKKVFRSRD-VFLEDQ-F 207
           FGCKAYVHVPKDERSKLD K + C+F+GYG +  GY+ +DPV+KK+ RSRD VF+EDQ  
Sbjct: 648 FGCKAYVHVPKDERSKLDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTI 707

Query: 206 GEVEKIDNA 180
            +++K++ +
Sbjct: 708 EDIDKVEKS 716


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