BLASTX nr result

ID: Angelica22_contig00031279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031279
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
emb|CBI39640.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002512554.1| pentatricopeptide repeat-containing protein,...    60   2e-07

>ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/75 (54%), Positives = 49/75 (65%)
 Frame = +3

Query: 9   LRGYV*K*SITEAETLSKQIPRKNIFS*TVMLGGLI*DNN*IIC*YS*IVDMMPMKDVVA 188
           +RGYV +  I+EAETL  Q+P KN+ S TVMLGGL+ +    I     + DMMP KDVV 
Sbjct: 198 VRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGR--IDEACRLFDMMPEKDVVT 255

Query: 189 RTNMIAGYRQGGSRV 233
           RTNMI GY Q G  V
Sbjct: 256 RTNMIGGYCQVGRLV 270


>ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/75 (54%), Positives = 49/75 (65%)
 Frame = +3

Query: 9   LRGYV*K*SITEAETLSKQIPRKNIFS*TVMLGGLI*DNN*IIC*YS*IVDMMPMKDVVA 188
           +RGYV +  I+EAETL  Q+P KN+ S TVMLGGL+ +    I     + DMMP KDVV 
Sbjct: 198 VRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGR--IDEACRLFDMMPEKDVVT 255

Query: 189 RTNMIAGYRQGGSRV 233
           RTNMI GY Q G  V
Sbjct: 256 RTNMIGGYCQVGRLV 270


>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/72 (55%), Positives = 50/72 (69%)
 Frame = +3

Query: 9   LRGYV*K*SITEAETLSKQIPRKNIFS*TVMLGGLI*DNN*IIC*YS*IVDMMPMKDVVA 188
           +RGYV +  ++EAETL  Q+P KN+ S TVMLGGLI      I     + D+MP+KDVVA
Sbjct: 116 VRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRR--IDEARGLFDIMPVKDVVA 173

Query: 189 RTNMIAGYRQGG 224
           RTNMI+GY Q G
Sbjct: 174 RTNMISGYCQEG 185


>emb|CBI39640.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/72 (55%), Positives = 50/72 (69%)
 Frame = +3

Query: 9   LRGYV*K*SITEAETLSKQIPRKNIFS*TVMLGGLI*DNN*IIC*YS*IVDMMPMKDVVA 188
           +RGYV +  ++EAETL  Q+P KN+ S TVMLGGLI      I     + D+MP+KDVVA
Sbjct: 116 VRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRR--IDEARGLFDIMPVKDVVA 173

Query: 189 RTNMIAGYRQGG 224
           RTNMI+GY Q G
Sbjct: 174 RTNMISGYCQEG 185


>ref|XP_002512554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548515|gb|EEF50006.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
 Frame = +3

Query: 9   LRGYV*K*SITEAETLSKQIPRKNIFS*TVMLGGLI*DN--N*IIC*YS*IVDMMPMKDV 182
           +RGY+ +  I +AE+L  ++P KN+ S TVMLGGLI D   N  I  Y    D+MP+KDV
Sbjct: 117 VRGYIQEGMIKQAESLFWEMPEKNVVSWTVMLGGLIEDGRVNEAIKLY----DLMPLKDV 172

Query: 183 VARTNMIAG 209
           VARTNMI G
Sbjct: 173 VARTNMIGG 181


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