BLASTX nr result

ID: Angelica22_contig00031223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031223
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44336.1| unknown [Lotus japonicus]                               61   1e-07
ref|XP_003623247.1| F-box family protein [Medicago truncatula] g...    61   1e-07
ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...    61   1e-07
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|NP_187654.1| putative F-box protein [Arabidopsis thaliana] g...    60   2e-07

>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/54 (50%), Positives = 38/54 (70%)
 Frame = +2

Query: 173 LPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLKFSEKRLICNAH 334
           LP++++ EIL R PV+SLL+F+CV K W L IS P F+ KHL  S++  + N H
Sbjct: 63  LPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQSTLFNHH 116


>ref|XP_003623247.1| F-box family protein [Medicago truncatula]
           gi|355498262|gb|AES79465.1| F-box family protein
           [Medicago truncatula]
          Length = 396

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +2

Query: 170 TLPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLKFSEK 313
           TLP D++ EILYR PV+SL++FKCV K W   ISHP+F  KH   S K
Sbjct: 48  TLPFDLVLEILYRLPVKSLMQFKCVCKSWKSFISHPKFAKKHFCVSTK 95


>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = +2

Query: 158 LAGKTLPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLK 301
           + G  LPED++ EIL R PV++LL+FKCV K WY  I+ P F+ KHL+
Sbjct: 37  MTGHPLPEDVVIEILSRLPVKNLLQFKCVCKSWYAIITSPNFISKHLR 84


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/78 (43%), Positives = 46/78 (58%)
 Frame = +2

Query: 152 ENLAGKTLPEDIITEILYRTPVRSLLRFKCVSKYWYLRISHPRFMYKHLKFSEKRLICNA 331
           E + G  LPED+I EIL R PV++LL+FKCV K W+  I+ P+ + KHL+        N 
Sbjct: 38  ETMTGDPLPEDVIIEILSRLPVKNLLQFKCVCKSWHAIITSPKLISKHLR--------NY 89

Query: 332 HDSTELTRKLVCYVRVTQ 385
           +D  +    L  Y RVTQ
Sbjct: 90  YDKNDSDCLLAQY-RVTQ 106


>ref|NP_187654.1| putative F-box protein [Arabidopsis thaliana]
           gi|75262273|sp|Q9CAE7.1|FB138_ARATH RecName:
           Full=Putative F-box protein At3g10430
           gi|12322782|gb|AAG51379.1|AC011560_11 hypothetical
           protein; 103495-104607 [Arabidopsis thaliana]
           gi|332641384|gb|AEE74905.1| putative F-box protein
           [Arabidopsis thaliana]
          Length = 370

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = +2

Query: 164 GKTLPEDIITEILYRTPVRSLLRFKCVSKYWYLRISH-PRFMYKHLKFSEKRLI 322
           G +LP D+I EIL RTP  SLLRFK   K WY  IS+  RFMYKHL  S KR +
Sbjct: 2   GSSLPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKRFL 55


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