BLASTX nr result

ID: Angelica22_contig00031210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00031210
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen...   140   8e-32
ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like...   135   3e-30
emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]   135   3e-30
ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like...   129   2e-28
ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like...   127   7e-28

>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
          Length = 1023

 Score =  140 bits (354), Expect = 8e-32
 Identities = 77/113 (68%), Positives = 88/113 (77%)
 Frame = -1

Query: 447 STSLQTLIQTIESKTTLPPHLQRIFLSSRRLLIDESNAIDSISSLGVNRHSTLVLHVPLL 268
           +TSLQ L   IE K+ +P  LQR+FLSSRRL+  +  A  +IS+ GV  +STL L+ PLL
Sbjct: 20  TTSLQALHLEIERKSGVPVTLQRLFLSSRRLIGGDGTA--TISAFGVGLNSTLTLYFPLL 77

Query: 267 GGMQAPVTNAPKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 109
           GGMQAPV   PK+RLE LN KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 78  GGMQAPVV--PKSRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 128


>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
          Length = 1023

 Score =  135 bits (341), Expect = 3e-30
 Identities = 74/113 (65%), Positives = 83/113 (73%)
 Frame = -1

Query: 447 STSLQTLIQTIESKTTLPPHLQRIFLSSRRLLIDESNAIDSISSLGVNRHSTLVLHVPLL 268
           +T+ +TL   IE +  +P  LQRIFL+ RRL+ DES  I   + LGV   S L LH+PL 
Sbjct: 20  ATTFETLKHQIERELGIPLSLQRIFLNPRRLIGDESALI---AELGVRSDSALTLHLPLF 76

Query: 267 GGMQAPVTNAPKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 109
           GGMQAPV   PK RLE LN KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 77  GGMQAPVV--PKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 127


>emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
          Length = 1023

 Score =  135 bits (341), Expect = 3e-30
 Identities = 74/113 (65%), Positives = 83/113 (73%)
 Frame = -1

Query: 447 STSLQTLIQTIESKTTLPPHLQRIFLSSRRLLIDESNAIDSISSLGVNRHSTLVLHVPLL 268
           +T+ +TL   IE +  +P  LQRIFL+ RRL+ DES  I   + LGV   S L LH+PL 
Sbjct: 20  ATTFETLKHQIERELGIPLSLQRIFLNPRRLIGDESALI---AELGVRSDSALTLHLPLF 76

Query: 267 GGMQAPVTNAPKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 109
           GGMQAPV   PK RLE LN KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 77  GGMQAPVV--PKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 127


>ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1041

 Score =  129 bits (324), Expect = 2e-28
 Identities = 73/117 (62%), Positives = 81/117 (69%), Gaps = 3/117 (2%)
 Frame = -1

Query: 450 NSTSLQTLIQTIESKTTLPPHLQRIFLS-SRRLLIDESNAIDS--ISSLGVNRHSTLVLH 280
           N+T+L  L   I+   TLP   QR+FLS SRRL  D   + DS  IS LGV  +STL LH
Sbjct: 19  NTTTLHLLKLAIQQTLTLPISHQRLFLSHSRRLTADNDGSDDSLLISDLGVGPYSTLTLH 78

Query: 279 VPLLGGMQAPVTNAPKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 109
           VP LGG   P    PK R + LN+KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 79  VPFLGGTNPPAV--PKPRFDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 133


>ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1034

 Score =  127 bits (320), Expect = 7e-28
 Identities = 73/117 (62%), Positives = 81/117 (69%), Gaps = 3/117 (2%)
 Frame = -1

Query: 450 NSTSLQTLIQTIESKTTLPPHLQRIFLS-SRRLLIDESNAIDS--ISSLGVNRHSTLVLH 280
           N+T+L  L   I+   TLP   QR+FLS SRRL  D   + DS  IS LGV  +STL LH
Sbjct: 19  NTTTLHLLKLAIQHILTLPISHQRLFLSHSRRLSADNDGSDDSLLISDLGVGPYSTLTLH 78

Query: 279 VPLLGGMQAPVTNAPKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 109
           VP LGG   P    PK R + LN+KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 79  VPFLGGTNPPAV--PKPRFDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 133


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