BLASTX nr result

ID: Angelica22_contig00030997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030997
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   363   2e-98
emb|CBI20856.3| unnamed protein product [Vitis vinifera]              363   2e-98
ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arab...   361   9e-98
ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis th...   361   1e-97
ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2...   344   1e-92

>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  363 bits (932), Expect = 2e-98
 Identities = 175/212 (82%), Positives = 191/212 (90%)
 Frame = -1

Query: 637 MEIDRADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPKAGVNKNENPEKA 458
           MEI R DGRTANQLRPLACSRN+LNRAHGSASWSQG+TKVLAAVYGPKAG  KNENPEKA
Sbjct: 3   MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 62

Query: 457 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 278
           C EV+WKPKTGQIGK EKEYE+ILKRT++SICL N+NPNTTTSIIIQVV DDGALLPCAI
Sbjct: 63  CIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAI 122

Query: 277 NAACAALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLEEQTLKAFAYLVFPNSSISLPS 98
           NAACAALVDA IPLKHLAVAICCC+ ++G+VILDP K+EEQ +KAFAYLVFPNS+IS+  
Sbjct: 123 NAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNSAISIIP 182

Query: 97  EASSKLGGEPMEHGIITSVTRGVMPVDDYFHC 2
           E SS + GE MEHGIITSVT GVM VDDY HC
Sbjct: 183 EGSSHMEGELMEHGIITSVTHGVMSVDDYLHC 214


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  363 bits (932), Expect = 2e-98
 Identities = 175/212 (82%), Positives = 191/212 (90%)
 Frame = -1

Query: 637 MEIDRADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPKAGVNKNENPEKA 458
           MEI R DGRTANQLRPLACSRN+LNRAHGSASWSQG+TKVLAAVYGPKAG  KNENPEKA
Sbjct: 1   MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 457 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 278
           C EV+WKPKTGQIGK EKEYE+ILKRT++SICL N+NPNTTTSIIIQVV DDGALLPCAI
Sbjct: 61  CIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAI 120

Query: 277 NAACAALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLEEQTLKAFAYLVFPNSSISLPS 98
           NAACAALVDA IPLKHLAVAICCC+ ++G+VILDP K+EEQ +KAFAYLVFPNS+IS+  
Sbjct: 121 NAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNSAISIIP 180

Query: 97  EASSKLGGEPMEHGIITSVTRGVMPVDDYFHC 2
           E SS + GE MEHGIITSVT GVM VDDY HC
Sbjct: 181 EGSSHMEGELMEHGIITSVTHGVMSVDDYLHC 212


>ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp.
           lyrata] gi|297323302|gb|EFH53723.1| hypothetical protein
           ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score =  361 bits (927), Expect = 9e-98
 Identities = 171/212 (80%), Positives = 191/212 (90%)
 Frame = -1

Query: 637 MEIDRADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPKAGVNKNENPEKA 458
           MEIDR DGRT NQLRPLACSRN+L+R HGSASWSQG+TKVLAAVYGPKAG  KNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 457 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 278
           CFEVIWKPKTGQIGK EKEYEMI+KRT+QSIC+  VNPNTTTS+IIQVVHDDG+LLPCAI
Sbjct: 61  CFEVIWKPKTGQIGKVEKEYEMIMKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 277 NAACAALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLEEQTLKAFAYLVFPNSSISLPS 98
           NAACAALVDAGIP+KHLAVAICCC+A NG+++LDPNKLEE+ + AFAYLVFPN+++S+  
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLADNGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 97  EASSKLGGEPMEHGIITSVTRGVMPVDDYFHC 2
           E SS   GEP+EHGIITSVT GVM VDDYF C
Sbjct: 181 EGSSVAEGEPVEHGIITSVTHGVMSVDDYFLC 212


>ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis thaliana]
           gi|79314404|ref|NP_001030817.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314427|ref|NP_001030818.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314448|ref|NP_001030819.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|145332769|ref|NP_001078250.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|334185757|ref|NP_001190019.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|7799009|emb|CAB90948.1| putative protein [Arabidopsis
           thaliana] gi|27808554|gb|AAO24557.1| At3g46210
           [Arabidopsis thaliana] gi|110736314|dbj|BAF00127.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|222423954|dbj|BAH19939.1| AT3G46210 [Arabidopsis
           thaliana] gi|222424492|dbj|BAH20201.1| AT3G46210
           [Arabidopsis thaliana] gi|332644608|gb|AEE78129.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644609|gb|AEE78130.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644610|gb|AEE78131.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644611|gb|AEE78132.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644612|gb|AEE78133.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644613|gb|AEE78134.1| exosome complex component
           RRP46 [Arabidopsis thaliana]
          Length = 239

 Score =  361 bits (926), Expect = 1e-97
 Identities = 170/212 (80%), Positives = 192/212 (90%)
 Frame = -1

Query: 637 MEIDRADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPKAGVNKNENPEKA 458
           MEIDR DGRT NQLRPLACSRN+L+R HGSASWSQG+TKVLAAVYGPKAG  KNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 457 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 278
           CFEVIWKPK+GQIGK EKEYEMILKRT+QSIC+  VNPNTTTS+IIQVVHDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 277 NAACAALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLEEQTLKAFAYLVFPNSSISLPS 98
           NAACAALVDAGIP+KHLAVAICCC+A+NG+++LDPNKLEE+ + AFAYLVFPN+++S+  
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 97  EASSKLGGEPMEHGIITSVTRGVMPVDDYFHC 2
           E SS   GEP+EHGIITS+T GVM VDDYF C
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLC 212


>ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  344 bits (882), Expect = 1e-92
 Identities = 164/212 (77%), Positives = 187/212 (88%)
 Frame = -1

Query: 637 MEIDRADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPKAGVNKNENPEKA 458
           ME DR DGR+ +QLRPL+C+RNVL+RAHGSASWSQG+TKVLAAVYGPKAG  KNENPEKA
Sbjct: 1   MESDRDDGRSPSQLRPLSCARNVLHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 457 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 278
           C EVIWKPKTGQIGK EKE+EMILKRT+QSIC+  +NPNTTTSII+QVV+DDGALL CAI
Sbjct: 61  CIEVIWKPKTGQIGKLEKEFEMILKRTLQSICILTLNPNTTTSIIVQVVNDDGALLVCAI 120

Query: 277 NAACAALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLEEQTLKAFAYLVFPNSSISLPS 98
           NAACAALVDAGIP+KHLAVAICCC+A+ G+VILDP KLEEQ ++ F YLVFPNS +S+  
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAEGGYVILDPTKLEEQKMRGFTYLVFPNSVVSVLP 180

Query: 97  EASSKLGGEPMEHGIITSVTRGVMPVDDYFHC 2
           E SS + GEPMEHGIITSVT GVM V++Y  C
Sbjct: 181 EGSSHVEGEPMEHGIITSVTHGVMSVEEYLKC 212


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