BLASTX nr result

ID: Angelica22_contig00030920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030920
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326541.1| predicted protein [Populus trichocarpa] gi|2...   158   1e-36
gb|ABK94686.1| unknown [Populus trichocarpa]                          156   5e-36
ref|XP_002528545.1| nucleic acid binding protein, putative [Rici...   149   8e-34
ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group] g...   144   3e-32
gb|EAY91637.1| hypothetical protein OsI_13273 [Oryza sativa Indi...   143   4e-32

>ref|XP_002326541.1| predicted protein [Populus trichocarpa] gi|222833863|gb|EEE72340.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  158 bits (400), Expect = 1e-36
 Identities = 104/252 (41%), Positives = 143/252 (56%), Gaps = 48/252 (19%)
 Frame = +3

Query: 144 QIRTVQVSNLSLWASTRSIISFFSSCGDIEFVEMQSKSEQSQIAFVTFKHSLGADCAIML 323
           Q++TV+VSN+SL AS R +  FFS  GDIE+VEM+S +E+SQIA+VTFK S GAD A++L
Sbjct: 2   QVKTVKVSNVSLGASERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQGADTAVLL 61

Query: 324 SGTKLLDLTVIVSLVLSREI-PTSFPHL-ATGEKATDGAESYISKTKDVFSGILEKGYVL 497
           SG  ++DL+V V+L    ++ P +   L ATG KA  G ES + K +DV SG+L KG++L
Sbjct: 62  SGATIVDLSVTVALDPDYQLPPAALAELSATGNKA-PGDESALRKAEDVVSGMLAKGFIL 120

Query: 498 GK----------------------------------AFAVGTS---DKVQQVDQNLQ--- 557
           GK                                    + GT+   DKV++VDQ  Q   
Sbjct: 121 GKDAINKAKGFDEKHQLTSTASAKVVSFDKKIGLTEKISAGTTVVGDKVREVDQKFQVSE 180

Query: 558 ------XXXXXXXXXXXXXXLSNQYVSIGASWVTVAFDSIAKAAAEVSQRAKEKAAIVEE 719
                               +SN+YV  GA+WVT AF+ +AKAA +V Q+AKEKA + EE
Sbjct: 181 KTKSAFAVAEQKVSSAGSAIMSNRYVFTGAAWVTGAFNKVAKAAGDVGQKAKEKAGMAEE 240

Query: 720 EQRRKMIAEEEQ 755
           EQ+RKM+ +  Q
Sbjct: 241 EQKRKMVDDFAQ 252


>gb|ABK94686.1| unknown [Populus trichocarpa]
          Length = 280

 Score =  156 bits (395), Expect = 5e-36
 Identities = 103/251 (41%), Positives = 142/251 (56%), Gaps = 48/251 (19%)
 Frame = +3

Query: 147 IRTVQVSNLSLWASTRSIISFFSSCGDIEFVEMQSKSEQSQIAFVTFKHSLGADCAIMLS 326
           ++TV+VSN+SL AS R +  FFS  GDIE+VEM+S +E+SQIA+VTFK S GAD A++LS
Sbjct: 3   VKTVKVSNVSLGASERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQGADTAVLLS 62

Query: 327 GTKLLDLTVIVSLVLSREI-PTSFPHL-ATGEKATDGAESYISKTKDVFSGILEKGYVLG 500
           G  ++DL+V V+L    ++ P +   L ATG KA  G ES + K +DV SG+L KG++LG
Sbjct: 63  GATIVDLSVTVALDPDYQLPPAALAELSATGNKA-PGDESALRKAEDVVSGMLAKGFILG 121

Query: 501 K----------------------------------AFAVGTS---DKVQQVDQNLQ---- 557
           K                                    + GT+   DKV++VDQ  Q    
Sbjct: 122 KDAINKAKGFDEKHQLTSTASAKVVSFDKKIGLTEKISAGTTVVGDKVREVDQKFQVSEK 181

Query: 558 -----XXXXXXXXXXXXXXLSNQYVSIGASWVTVAFDSIAKAAAEVSQRAKEKAAIVEEE 722
                              +SN+YV  GA+WVT AF+ +AKAA +V Q+AKEKA + EEE
Sbjct: 182 TKSAFAVAEQKVSSAGSAIMSNRYVFTGAAWVTGAFNKVAKAAGDVGQKAKEKAGMAEEE 241

Query: 723 QRRKMIAEEEQ 755
           Q+RKM+ +  Q
Sbjct: 242 QKRKMVDDFAQ 252


>ref|XP_002528545.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532047|gb|EEF33857.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 275

 Score =  149 bits (376), Expect = 8e-34
 Identities = 100/277 (36%), Positives = 143/277 (51%), Gaps = 46/277 (16%)
 Frame = +3

Query: 144 QIRTVQVSNLSLWASTRSIISFFSSCGDIEFVEMQSKSEQSQIAFVTFKHSLGADCAIML 323
           ++RTV+VSN+SL A+ R +  FFS  GDIE+VE++   E+SQIA+VT+K S GA+ A++L
Sbjct: 2   RVRTVKVSNVSLGATERDLREFFSFSGDIEYVEVRRDDEKSQIAYVTYKDSQGAETAVLL 61

Query: 324 SGTKLLDLTVIVSLVLSREIPTSFPHLATGEKATDGAESYISKTKDVFSGILEKGYVLGK 503
           SG  ++DL+V ++L    ++P +     T  K   GAES + K +DV + +L KG++LGK
Sbjct: 62  SGATIVDLSVSITLDPDYQLPPA----VTQNKTPGGAESALRKAEDVVTSMLAKGFILGK 117

Query: 504 ----------------------------------AFAVGT---SDKVQQVDQNLQXXXXX 572
                                               + GT   SDKV++VDQ  Q     
Sbjct: 118 DAVNKAKTFDDKHQLTSTASAKVVSLDKKIGLTDKISAGTTIVSDKVREVDQKFQVSEKT 177

Query: 573 XXXXXXXXX---------LSNQYVSIGASWVTVAFDSIAKAAAEVSQRAKEKAAIVEEEQ 725
                             + N+YV  GASWVT AF+ +AKAA EV Q+AKEK  + E+EQ
Sbjct: 178 KTAFAAAEQKVSSAGVAIMKNRYVFTGASWVTGAFNKVAKAAGEVGQKAKEKVGMAEDEQ 237

Query: 726 RRKMIAEEEQERKTM*YPVKVHASNPYIDSYKNLHLP 836
           +RKM+ +  Q          VH S     S +  HLP
Sbjct: 238 KRKMVDDFAQ----------VHLSESPKASSEGEHLP 264


>ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group]
           gi|18071362|gb|AAL58221.1|AC090882_24 putative splicing
           regulatory protein [Oryza sativa Japonica Group]
           gi|108710741|gb|ABF98536.1| RRM-containing protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113549544|dbj|BAF12987.1| Os03g0713600 [Oryza sativa
           Japonica Group]
          Length = 284

 Score =  144 bits (363), Expect = 3e-32
 Identities = 100/266 (37%), Positives = 138/266 (51%), Gaps = 46/266 (17%)
 Frame = +3

Query: 144 QIRTVQVSNLSLWASTRSIISFFSSCGDIEFVEMQSKSEQSQIAFVTFKHSLGADCAIML 323
           ++RTV+VSN+SL AS R I  FFS  GDIE+VEMQS+SE+SQ+A+VTFK S GAD A++L
Sbjct: 2   EVRTVKVSNISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQGADTAVLL 61

Query: 324 SGTKLLDLTVIVSLVLSREIPTSFPHLATGEKATDGAESYISKTKDVFSGILEKGYVLGK 503
           SG  ++D +VI++ V++ ++P      + GEK++  AES + K +DV S +L KG+VL K
Sbjct: 62  SGATIVDRSVIITPVVNYQLPPDARKQSAGEKSSS-AESVVRKAEDVVSSMLAKGFVLSK 120

Query: 504 -AFAVGTS------------------------------------DKVQQVDQNLQXXXXX 572
            A  V  S                                     KV++VD   Q     
Sbjct: 121 DALNVARSFDERHNILSNATATVASLDRQYGVSEKISLGRAIVGSKVKEVDDRYQVSELT 180

Query: 573 XXXXXXXXX---------LSNQYVSIGASWVTVAFDSIAKAAAEVSQRAKEKAAIVEEEQ 725
                             ++NQYVS GASW+T AF  + KAA ++S   K+K    EEE 
Sbjct: 181 KSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAEEE- 239

Query: 726 RRKMIAEEEQERKTM*YPVKVHASNP 803
            RK I  EE+      Y  K+H   P
Sbjct: 240 -RKAIMWEERNGLVSDY-AKIHLDEP 263


>gb|EAY91637.1| hypothetical protein OsI_13273 [Oryza sativa Indica Group]
           gi|125587696|gb|EAZ28360.1| hypothetical protein
           OsJ_12338 [Oryza sativa Japonica Group]
          Length = 305

 Score =  143 bits (361), Expect = 4e-32
 Identities = 100/265 (37%), Positives = 137/265 (51%), Gaps = 46/265 (17%)
 Frame = +3

Query: 147 IRTVQVSNLSLWASTRSIISFFSSCGDIEFVEMQSKSEQSQIAFVTFKHSLGADCAIMLS 326
           +RTV+VSN+SL AS R I  FFS  GDIE+VEMQS+SE+SQ+A+VTFK S GAD A++LS
Sbjct: 24  VRTVKVSNISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQGADTAVLLS 83

Query: 327 GTKLLDLTVIVSLVLSREIPTSFPHLATGEKATDGAESYISKTKDVFSGILEKGYVLGK- 503
           G  ++D +VI++ V++ ++P      + GEK++  AES + K +DV S +L KG+VL K 
Sbjct: 84  GATIVDRSVIITPVVNYQLPPDARKQSAGEKSSS-AESVVRKAEDVVSSMLAKGFVLSKD 142

Query: 504 AFAVGTS------------------------------------DKVQQVDQNLQXXXXXX 575
           A  V  S                                     KV++VD   Q      
Sbjct: 143 ALNVARSFDERHNILSNATATVASLDRQYGVSEKISLGRAIVGSKVKEVDDRYQVSELTK 202

Query: 576 XXXXXXXX---------LSNQYVSIGASWVTVAFDSIAKAAAEVSQRAKEKAAIVEEEQR 728
                            ++NQYVS GASW+T AF  + KAA ++S   K+K    EEE  
Sbjct: 203 SALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAEEE-- 260

Query: 729 RKMIAEEEQERKTM*YPVKVHASNP 803
           RK I  EE+      Y  K+H   P
Sbjct: 261 RKAIMWEERNGLVSDY-AKIHLDEP 284


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