BLASTX nr result
ID: Angelica22_contig00030901
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00030901
(738 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22748.3| unnamed protein product [Vitis vinifera] 351 1e-94
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi... 351 1e-94
ref|NP_191564.1| pentatricopeptide repeat-containing protein [Ar... 329 3e-88
ref|XP_002878314.1| pentatricopeptide repeat-containing protein ... 324 1e-86
ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containi... 322 4e-86
>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 351 bits (900), Expect = 1e-94
Identities = 171/211 (81%), Positives = 189/211 (89%)
Frame = -1
Query: 735 KYRLGKLEQFHRLLEEMGRNGFSPDSHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEAS 556
KYRLGKL+QFHRLLEE+G NGFSPD HTFNILLH+LGKG+KPLAAL+LLNHMKEVG + S
Sbjct: 308 KYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDPS 367
Query: 555 VLHFTTLIDGLSRAGNLDACKYFFTEMTKYGCSPDVVCYTVIITGFIVAGELETAQEYFT 376
VLHFTTLIDGLSRAGNLDACKYFF EM K GC PDVVCYTV+ITG+IVAGELE AQ F
Sbjct: 368 VLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLFE 427
Query: 375 EMIVKGQVPNVFTYNSMIRGLCMAGMFKEACLMLEDMESRGCNPNFLVYNTLVSYLRNAG 196
EM VKGQ+PNVFTYNSMIRGLCMA F+EA ML++MESRGCNPNFLVYNTLV LRNAG
Sbjct: 428 EMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNAG 487
Query: 195 KMSEANEVIRVMVEKGRYVNLISKFKRYRRC 103
K+ EA+EVIR MV+KG+YV+L+SKFK YRRC
Sbjct: 488 KLKEAHEVIRHMVDKGQYVHLLSKFKGYRRC 518
>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Vitis vinifera]
Length = 514
Score = 351 bits (900), Expect = 1e-94
Identities = 171/211 (81%), Positives = 189/211 (89%)
Frame = -1
Query: 735 KYRLGKLEQFHRLLEEMGRNGFSPDSHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEAS 556
KYRLGKL+QFHRLLEE+G NGFSPD HTFNILLH+LGKG+KPLAAL+LLNHMKEVG + S
Sbjct: 304 KYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDPS 363
Query: 555 VLHFTTLIDGLSRAGNLDACKYFFTEMTKYGCSPDVVCYTVIITGFIVAGELETAQEYFT 376
VLHFTTLIDGLSRAGNLDACKYFF EM K GC PDVVCYTV+ITG+IVAGELE AQ F
Sbjct: 364 VLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLFE 423
Query: 375 EMIVKGQVPNVFTYNSMIRGLCMAGMFKEACLMLEDMESRGCNPNFLVYNTLVSYLRNAG 196
EM VKGQ+PNVFTYNSMIRGLCMA F+EA ML++MESRGCNPNFLVYNTLV LRNAG
Sbjct: 424 EMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNAG 483
Query: 195 KMSEANEVIRVMVEKGRYVNLISKFKRYRRC 103
K+ EA+EVIR MV+KG+YV+L+SKFK YRRC
Sbjct: 484 KLKEAHEVIRHMVDKGQYVHLLSKFKGYRRC 514
>ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g60050 gi|7076758|emb|CAB75920.1| putative protein
[Arabidopsis thaliana] gi|332646485|gb|AEE80006.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 473
Score = 329 bits (844), Expect = 3e-88
Identities = 154/209 (73%), Positives = 185/209 (88%)
Frame = -1
Query: 732 YRLGKLEQFHRLLEEMGRNGFSPDSHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEASV 553
YRLGK+++F RL +EM R+GFSPDS+T+NILLH+LGKG+KPLAAL LNHMKEVGI+ SV
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 552 LHFTTLIDGLSRAGNLDACKYFFTEMTKYGCSPDVVCYTVIITGFIVAGELETAQEYFTE 373
LH+TTLIDGLSRAGNL+ACKYF EM K GC PDVVCYTV+ITG++V+GEL+ A+E F E
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 372 MIVKGQVPNVFTYNSMIRGLCMAGMFKEACLMLEDMESRGCNPNFLVYNTLVSYLRNAGK 193
M VKGQ+PNVFTYNSMIRGLCMAG F+EAC +L++MESRGCNPNF+VY+TLVSYLR AGK
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 444
Query: 192 MSEANEVIRVMVEKGRYVNLISKFKRYRR 106
+SEA +VIR MV+KG YV+L+ K +YRR
Sbjct: 445 LSEARKVIREMVKKGHYVHLVPKMMKYRR 473
Score = 72.4 bits (176), Expect = 9e-11
Identities = 47/192 (24%), Positives = 85/192 (44%)
Frame = -1
Query: 723 GKLEQFHRLLEEMGRNGFSPDSHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEASVLHF 544
G+ + RL++EM ++GF + TFN+L+ G+ A+ K +
Sbjct: 163 GEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSY 222
Query: 543 TTLIDGLSRAGNLDACKYFFTEMTKYGCSPDVVCYTVIITGFIVAGELETAQEYFTEMIV 364
+++ L ++ + +M + G SPDV+ Y +++ G+++ F EM
Sbjct: 223 NAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMAR 282
Query: 363 KGQVPNVFTYNSMIRGLCMAGMFKEACLMLEDMESRGCNPNFLVYNTLVSYLRNAGKMSE 184
G P+ +TYN ++ L A L M+ G +P+ L Y TL+ L AG +
Sbjct: 283 DGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEA 342
Query: 183 ANEVIRVMVEKG 148
+ MV+ G
Sbjct: 343 CKYFLDEMVKAG 354
>ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324152|gb|EFH54573.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 475
Score = 324 bits (830), Expect = 1e-86
Identities = 152/209 (72%), Positives = 183/209 (87%)
Frame = -1
Query: 732 YRLGKLEQFHRLLEEMGRNGFSPDSHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEASV 553
YRLGK+++F RL +EM R+G SPD +T+NILLH+LGKG+KPLAAL LNHMKEVGI+ SV
Sbjct: 267 YRLGKMDRFDRLFDEMARDGLSPDFYTYNILLHILGKGNKPLAALTTLNHMKEVGIDLSV 326
Query: 552 LHFTTLIDGLSRAGNLDACKYFFTEMTKYGCSPDVVCYTVIITGFIVAGELETAQEYFTE 373
LH+TTLIDGLSRAGNL+ACKYF EM K GC PDVVCYTV+ITG++V+GELE A+E F E
Sbjct: 327 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKE 386
Query: 372 MIVKGQVPNVFTYNSMIRGLCMAGMFKEACLMLEDMESRGCNPNFLVYNTLVSYLRNAGK 193
M V+GQ+PNVFTYNSMIRGLCMAG F+EAC +L++MESRGCNPNF+VY+TLVSYLR AGK
Sbjct: 387 MTVEGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 446
Query: 192 MSEANEVIRVMVEKGRYVNLISKFKRYRR 106
+SEA +VIR MV+KG YV+L+ K +YRR
Sbjct: 447 LSEARKVIRDMVKKGHYVHLVPKMMKYRR 475
Score = 70.1 bits (170), Expect = 5e-10
Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 35/234 (14%)
Frame = -1
Query: 723 GKLEQFHRLLEEMGRNGFSPDSHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEASVLHF 544
G+ + RL++EM ++GF + TFN+L+ G+ A+ K +
Sbjct: 165 GEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSY 224
Query: 543 TTLIDGLSRAGNLDACKYFFTEMTKYGCSPDVVCYTVIITGFIVAGELETAQEYFTEMIV 364
+++ L ++ + +M + G SPDV+ Y +++ G+++ F EM
Sbjct: 225 NAILNSLLGVKQYKLIEWVYEQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMAR 284
Query: 363 KGQVPNVFTYN-----------------------------------SMIRGLCMAGMFKE 289
G P+ +TYN ++I GL AG +
Sbjct: 285 DGLSPDFYTYNILLHILGKGNKPLAALTTLNHMKEVGIDLSVLHYTTLIDGLSRAGNLEA 344
Query: 288 ACLMLEDMESRGCNPNFLVYNTLVSYLRNAGKMSEANEVIRVMVEKGRYVNLIS 127
L++M GC P+ + Y +++ +G++ +A E+ + M +G+ N+ +
Sbjct: 345 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEMTVEGQLPNVFT 398
>ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 322 bits (826), Expect = 4e-86
Identities = 154/209 (73%), Positives = 179/209 (85%)
Frame = -1
Query: 729 RLGKLEQFHRLLEEMGRNGFSPDSHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEASVL 550
+LGKL+QFHRLL+EM R GFSPD HT+NILL+VLGKGDKPLAALNLLNHM+EVG +VL
Sbjct: 268 KLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVL 327
Query: 549 HFTTLIDGLSRAGNLDACKYFFTEMTKYGCSPDVVCYTVIITGFIVAGELETAQEYFTEM 370
HFTTLI+GLSRAGNLDACKYFF E+ GC PDVVCYTV+IT F AG+ E A+ +F EM
Sbjct: 328 HFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEM 387
Query: 369 IVKGQVPNVFTYNSMIRGLCMAGMFKEACLMLEDMESRGCNPNFLVYNTLVSYLRNAGKM 190
I+KGQ+PNVFTYNSMIRG CM G FKEA ML +MESRGC PNFLVY+TLVSYLRNAGK+
Sbjct: 388 IMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKL 447
Query: 189 SEANEVIRVMVEKGRYVNLISKFKRYRRC 103
EA++VI+ MVE G+Y +L++KFK YRRC
Sbjct: 448 GEAHKVIKQMVENGQYAHLMTKFKGYRRC 476
Score = 59.7 bits (143), Expect = 6e-07
Identities = 38/176 (21%), Positives = 78/176 (44%)
Frame = -1
Query: 657 HTFNILLHVLGKGDKPLAALNLLNHMKEVGIEASVLHFTTLIDGLSRAGNLDACKYFFTE 478
++++I++ + + ++ A +L+ M E G + F LI AG F +
Sbjct: 152 NSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIK 211
Query: 477 MTKYGCSPDVVCYTVIITGFIVAGELETAQEYFTEMIVKGQVPNVFTYNSMIRGLCMAGM 298
+ P Y I+ G ++ + + + +M++ P++ TYN ++ C G
Sbjct: 212 SKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGK 271
Query: 297 FKEACLMLEDMESRGCNPNFLVYNTLVSYLRNAGKMSEANEVIRVMVEKGRYVNLI 130
+ +L++M +G +P+F YN L+ L K A ++ M E G N++
Sbjct: 272 LDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVL 327
Score = 59.7 bits (143), Expect = 6e-07
Identities = 42/171 (24%), Positives = 69/171 (40%)
Frame = -1
Query: 702 RLLEEMGRNGFSPDSHTFNILLHVLGKGDKPLAALNLLNHMKEVGIEASVLHFTTLIDGL 523
R+L+EM G+ + TF IL+ G+ + K + ++ GL
Sbjct: 172 RVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGL 231
Query: 522 SRAGNLDACKYFFTEMTKYGCSPDVVCYTVIITGFIVAGELETAQEYFTEMIVKGQVPNV 343
+ + +M SPD++ Y V++ G+L+ EM KG P+
Sbjct: 232 VIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDF 291
Query: 342 FTYNSMIRGLCMAGMFKEACLMLEDMESRGCNPNFLVYNTLVSYLRNAGKM 190
TYN ++ L A +L M G PN L + TL++ L AG +
Sbjct: 292 HTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNL 342