BLASTX nr result

ID: Angelica22_contig00030677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030677
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|NP_181376.3| pentatricopeptide repeat-containing protein [Ar...   100   2e-19
gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|3137637...   100   2e-19

>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
           gi|449483740|ref|XP_004156675.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
          Length = 491

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/103 (52%), Positives = 79/103 (76%)
 Frame = -2

Query: 312 LRALKQSASLLKPTHLLSSLIDSFTMYNCSTTPHAYHFVIKTLIKSSQWQELNLVLVRLE 133
           LR LKQ+A+  +P  LLS+L+ SFT Y+C  TP+AY+FV+KTL ++SQ+  +  VL RL+
Sbjct: 40  LRILKQAANPDQPHLLLSALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQ 99

Query: 132 KVEIFETPEVIFIDLIESFGNLNKIQESIDLFFKIPNFRCNPS 4
            +E F+TPE IF+DLI+ +G +N+IQ+++ LF +IP FRC PS
Sbjct: 100 FLENFQTPEYIFVDLIKLYGRMNRIQDAVTLFRRIPMFRCVPS 142


>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
 Frame = -2

Query: 297 QSASLLKPTH--LLSSLIDSFTMYNCSTTPHAYHFVIKTLIKSSQWQELNLVLVRLEKVE 124
           QS S   P++   LS LIDSF +YN   TP+AY FVI TL +  Q+  L  +L RLEKVE
Sbjct: 48  QSPSPQSPSNSQFLSILIDSFRIYNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVE 107

Query: 123 IFETPEVIFIDLIESFGNLNKIQESIDLFFKIPNFRCNPSV 1
            FETPE IF +LI+ +GN N  ++++DLFF+IPNFRC PSV
Sbjct: 108 KFETPEFIFTNLIKVYGNANMFEDAVDLFFRIPNFRCVPSV 148


>ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|222855149|gb|EEE92696.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/112 (50%), Positives = 74/112 (66%), Gaps = 8/112 (7%)
 Frame = -2

Query: 312 LRALKQSASLLKPT--------HLLSSLIDSFTMYNCSTTPHAYHFVIKTLIKSSQWQEL 157
           +++LKQSA  LKP         HLLSSLI SF++Y+    P A+ F+ KTL+K+SQ+  +
Sbjct: 39  MQSLKQSA--LKPPQQESPNKPHLLSSLIHSFSIYDVEPAPKAFDFIFKTLVKTSQFHHI 96

Query: 156 NLVLVRLEKVEIFETPEVIFIDLIESFGNLNKIQESIDLFFKIPNFRCNPSV 1
             VL  LEKVE FE PE  F  LIE +G  NK  E+I+LF++IP FRC PSV
Sbjct: 97  PSVLDHLEKVESFEPPESTFAYLIEVYGRTNKTHEAIELFYRIPKFRCVPSV 148


>ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g38420, mitochondrial; Flags: Precursor
           gi|3395430|gb|AAC28762.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254441|gb|AEC09535.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 453

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/88 (53%), Positives = 65/88 (73%)
 Frame = -2

Query: 267 LLSSLIDSFTMYNCSTTPHAYHFVIKTLIKSSQWQELNLVLVRLEKVEIFETPEVIFIDL 88
           ++ +L+ SF ++NC  TP AY FVIKTL KSSQ + ++ VL  LE  E F+TPE IF D+
Sbjct: 55  VMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDV 114

Query: 87  IESFGNLNKIQESIDLFFKIPNFRCNPS 4
           I ++G   +I+E+I++FFKIPNFRC PS
Sbjct: 115 IAAYGFSGRIEEAIEVFFKIPNFRCVPS 142


>gb|AAM98219.1| unknown protein [Arabidopsis thaliana] gi|31376375|gb|AAP49514.1|
           At2g38420 [Arabidopsis thaliana]
          Length = 444

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/88 (53%), Positives = 65/88 (73%)
 Frame = -2

Query: 267 LLSSLIDSFTMYNCSTTPHAYHFVIKTLIKSSQWQELNLVLVRLEKVEIFETPEVIFIDL 88
           ++ +L+ SF ++NC  TP AY FVIKTL KSSQ + ++ VL  LE  E F+TPE IF D+
Sbjct: 46  VMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDV 105

Query: 87  IESFGNLNKIQESIDLFFKIPNFRCNPS 4
           I ++G   +I+E+I++FFKIPNFRC PS
Sbjct: 106 IAAYGFSGRIEEAIEVFFKIPNFRCVPS 133


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