BLASTX nr result

ID: Angelica22_contig00030576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030576
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    77   2e-12
emb|CBI34941.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_003637624.1| Methyl binding domain protein [Medicago trun...    68   8e-10
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...    60   3e-07
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...    60   3e-07

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
 Frame = -3

Query: 500 IVQSYHSNLSSFPGAPATLPGDAID--CAACRXXXXXXXXXXXXXEFLVCDGCELGFHID 327
           +V+S+H  LS   GA A LPG+     CA C              + LVCDGCE GFH+ 
Sbjct: 46  VVRSFHGELSPAAGAAAGLPGEGWGSVCAVC-------GAPEVGAQVLVCDGCERGFHLV 98

Query: 326 CIGMRGREV-MVDEWLCCECSRKEVVRVRTRAKGDKRCP---NNKLVEVNELPRGDG--- 168
           C+GM GR+  M++EW+C EC R  V        G KR P     +L+++N  P  +G   
Sbjct: 99  CVGMPGRQAGMLEEWVCGECVRSGV--------GSKRWPLGSKRRLLDINASPPSEGEGE 150

Query: 167 QVPSSR 150
           ++P SR
Sbjct: 151 ELPDSR 156


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
 Frame = -3

Query: 500 IVQSYHSNLSSFPGAPATLPGDAID--CAACRXXXXXXXXXXXXXEFLVCDGCELGFHID 327
           +V+S+H  LS   GA A LPG+     CA C              + LVCDGCE GFH+ 
Sbjct: 46  VVRSFHGELSPAAGAAAGLPGEGWGSVCAVC-------GAPEVGAQVLVCDGCERGFHLV 98

Query: 326 CIGMRGREV-MVDEWLCCECSRKEVVRVRTRAKGDKRCP---NNKLVEVNELPRGDG--- 168
           C+GM GR+  M++EW+C EC R  V        G KR P     +L+++N  P  +G   
Sbjct: 99  CVGMPGRQAGMLEEWVCGECVRSGV--------GSKRWPLGSKRRLLDINASPPSEGEGE 150

Query: 167 QVPSSR 150
           ++P SR
Sbjct: 151 ELPDSR 156


>ref|XP_003637624.1| Methyl binding domain protein [Medicago truncatula]
           gi|355503559|gb|AES84762.1| Methyl binding domain
           protein [Medicago truncatula]
          Length = 240

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
 Frame = -3

Query: 500 IVQSYHSNLSSFPGAPATLPGDAIDCAACRXXXXXXXXXXXXXEFLVCDGCELGFHIDCI 321
           IV++YH N +  PG PA LPG    CA C                LVCDGCE  FH+ C 
Sbjct: 55  IVRTYHENPAPPPGGPAPLPGGVTSCAVCSKSGAGG---------LVCDGCERSFHLACA 105

Query: 320 GMRGREV---MVDEWLCCECSRKEVVRVRTRAKGDKRCP----NNKLVEVNELPRGD 171
           G+RG  +    + EW+C EC    V          KR P    + +L+++N  P  D
Sbjct: 106 GVRGGRIGAASIGEWVCGECLAGGV--------KSKRWPLGVKSKQLLDINASPPSD 154


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 38/184 (20%)
 Frame = -3

Query: 500 IVQSYHSNLSSFPGAPATLPGDAID--CAACRXXXXXXXXXXXXXEFLVCDGCELGFHID 327
           +V+++H N     G PA +P       C  C                +VCDGCE GFH+ 
Sbjct: 166 VVRTFHDNPPPSDGDPAHVPRGVRGSVCGLC-------GQPEVRGHVVVCDGCERGFHLA 218

Query: 326 CIGMRGREVM-VDEWLCCECSRKEVVRVRTRAKGDKRCP----NNKLVEVNELPRGDG-- 168
           C GMRG   +  ++W+C EC         T     KR P    + +L+++N  P  DG  
Sbjct: 219 CTGMRGGHALNFEDWVCGECF--------TTGVKSKRWPLGVKSKQLLDINASPPSDGDA 270

Query: 167 ------QVPSSR----------------------LLHREN-RSHFQASDLVHRSVKLGPE 75
                 ++P  R                      LLH  N   H +A D V   VK+G E
Sbjct: 271 YGEDGEELPGIRKHTAVDNSLRGTPFCSSAKYRNLLHSGNGYGHQRAPDTVKNKVKMGLE 330

Query: 74  ELIQ 63
           +++Q
Sbjct: 331 DVLQ 334


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 2131

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 38/184 (20%)
 Frame = -3

Query: 500 IVQSYHSNLSSFPGAPATLPGDAID--CAACRXXXXXXXXXXXXXEFLVCDGCELGFHID 327
           +V+++H N     G PA +P       C  C                +VCDGCE GFH+ 
Sbjct: 55  VVRTFHDNPPPSDGDPAHVPRGVRGSVCGLC-------GQPEVRGHVVVCDGCERGFHLA 107

Query: 326 CIGMRGREVM-VDEWLCCECSRKEVVRVRTRAKGDKRCP----NNKLVEVNELPRGDG-- 168
           C GMRG   +  ++W+C EC         T     KR P    + +L+++N  P  DG  
Sbjct: 108 CTGMRGGHALNFEDWVCGECF--------TTGVKSKRWPLGVKSKQLLDINASPPSDGDA 159

Query: 167 ------QVPSSR----------------------LLHREN-RSHFQASDLVHRSVKLGPE 75
                 ++P  R                      LLH  N   H +A D V   VK+G E
Sbjct: 160 YGEDGEELPGIRKHTAVDNSLRGTPFCSSAKYRNLLHSGNGYGHQRAPDTVKNKVKMGLE 219

Query: 74  ELIQ 63
           +++Q
Sbjct: 220 DVLQ 223


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